Genomic Map
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Target Gene Details
Entrez Gene ID: | 26121 |
Gene Name: | pre-mRNA processing factor 31 |
Gene Aliases: |
NY-BR-99, PRP31, RP11, SNRNP61 |
Location: |
Chr.19:54115410-54131719 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| PRPF31 | NM_015629.3 | 1 | 86 | NP_056444.3 |
| XM_006723137.3 | XP_006723200.1 | |||
| AY040822.1 | AAK77986.1 | |||
| BC117389.1 | ||||
| CN306666.1 | 1 | 86 | ||
| DQ426885.1 |
Target Gene Details
Entrez Gene ID: | 29844 |
Gene Name: | TCF3 fusion partner |
Gene Aliases: |
FB1, INO80F, amida |
Location: |
Chr.19:54107013-54115675 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| TFPT | NM_013342.3 | 1 | 181 | NP_037474.1 |
| AF052052.1 | AAD45182.1 | |||
| AK310627.1 | 1 | 163 | ||
| AK310647.1 | 1 | 152 | ||
| BI820344.1 | 1 | 181 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv510773 | Chr.19:54017180 - 54132236 on Build GRCh38 | Deletion |
 VSTM1
OSCAR
TARM1
TFPT
NDUFA3
PRPF31
|
| nsv515623 | Chr.19:54102901 - 54179150 on Build GRCh38 | Loss |
TMC4
CNOT3
MBOAT7
LENG1
TFPT
NDUFA3
PRPF31
|
| nsv953613 | Chr.19:54097214 - 54198733 on Build GRCh38 | Deletion |
OSCAR
TMC4
CNOT3
TSEN34
MBOAT7
LENG1
TFPT
NDUFA3
PRPF31
|
| esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion |
MIR520G
LILRA5
MIR522
MIR518B
MIR518D
VN1R2
MIR525
MIR520C
MIR1323
MIR526B
LILRA6
VN1R4
MIR1283-2
MIR526A2
MIR518A2
MIR517A
TPM3P9
MIR512-1
MIR516B2
ZNF845
MIR520A
MYADM
DPRX
MIR516A1
ZNF665
MIR515-2
MIR498
TMC4
MIR521-1
TSEN34
ZNF677
MBOAT7
MIR520F
MIR520H
PRPF31
MIR518C
VSTM1
MIR935
MIR523
MIR519B
MIR518A1
MIR526A1
MIR371A
MIR524
LILRB2
ZNF525
TARM1
LOC105372457
FAM90A27P
MIR519C
MIR515-1
LILRB5
MIR519D
MIR516A2
PRKCG
NLRP12
MIR518E
ZNF818P
CACNG6
ZNF765
NDUFA3
MIR527
CACNG8
MIR516B1
CNOT3
MIR371B
MIR520E
MIR4752
ZNF331
MIR519E
TFPT
CACNG7
MIR517C
MIR517B
MIR373
LOC284379
ZNF813
MIR1283-1
MIR521-2
MIR512-2
MIR519A2
MIR372
LENG1
MIR520B
RPS9
MIR518F
OSCAR
MIR519A1
MIR520D
BIRC8
ZNF761
LILRB3
|
| nsv470157 | Chr.19:54063999 - 54127773 on Build GRCh38 | Loss |
OSCAR
TARM1
TFPT
NDUFA3
PRPF31
|
| nsv833877 | Chr.19:53951529 - 54117323 on Build GRCh38 | Loss |
VSTM1
MIR935
CACNG8
OSCAR
CACNG6
TARM1
TFPT
NDUFA3
PRPF31
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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