Assay Details
Target Gene Details
Entrez Gene ID: | 84820 |
Gene Name: | RNA polymerase II subunit J4, pseudogene |
Gene Aliases: |
RPB11-phi |
Location: |
Chr.7:43940895-44019194 on Build GRCh38 |
Assay Gene Location: | Within Exon 16 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
POLR2J4 | NR_003655.3 | 16 | 4564 | |
BX537878.1 | 16 | 4519 |
Target Gene Details
Entrez Gene ID: | 51619 |
Gene Name: | ubiquitin conjugating enzyme E2 D4 (putative) |
Gene Aliases: |
HBUCE1 |
Location: |
Chr.7:43926436-43956136 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 3 - Intron 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
UBE2D4 | NM_015983.3 | NP_057067.1 | ||
XM_006715734.3 | XP_006715797.1 | |||
XM_011515420.2 | XP_011513722.1 | |||
XM_011515422.2 | XP_011513724.1 | |||
XM_011515423.2 | XP_011513725.1 | |||
XM_017012292.1 | XP_016867781.1 | |||
XM_017012293.1 | XP_016867782.1 | |||
XM_017012294.1 | XP_016867783.1 | |||
XM_017012295.1 | XP_016867784.1 | |||
AF125044.1 | AAD31180.1 | |||
AF125045.1 | AAD31181.1 | |||
AK001446.1 | BAA91697.1 | |||
BC004104.2 | AAH04104.1 | |||
BG499454.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759527 | Chr.7:43912940 - 44017192 on Build GRCh38 | Gain | POLR2J4 SPDYE1 URGCP UBE2D4 LOC107986791 |
nsv1032143 | Chr.7:43931542 - 43948877 on Build GRCh38 | Gain | POLR2J4 UBE2D4 |
nsv428165 | Chr.7:43855828 - 44172960 on Build GRCh38 | Gain | URGCP-MRPS24 GCK MYL7 POLM PGAM2 LOC107986791 AEBP1 DBNL POLR2J4 LINC00957 MIR6837 RASA4CP SPDYE1 MIR6838 MRPS24 URGCP UBE2D4 POLD2 MIR4649 |
nsv1016724 | Chr.7:43927631 - 43957476 on Build GRCh38 | Gain | POLR2J4 UBE2D4 |
nsv830980 | Chr.7:43865998 - 44078539 on Build GRCh38 | Loss | URGCP-MRPS24 POLM PGAM2 LOC107986791 DBNL POLR2J4 LINC00957 MIR6837 RASA4CP SPDYE1 MIR6838 MRPS24 URGCP UBE2D4 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |