Assay Details
Target Gene Details
Entrez Gene ID: | 79680 |
Gene Name: | chromosome 22 open reading frame 29 |
Gene Aliases: |
BOP |
Location: |
Chr.22:19846138-19854848 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
C22orf29 | NM_024627.5 | 3 | 1609 | NP_078903.3 |
AK024778.1 | 1 | 985 | BAB14998.1 | |
AK225088.1 | 1 | 985 | ||
AK291262.1 | 3 | 1577 | ||
AL832509.1 | 3 | 1498 | ||
BC011679.2 | 1 | 1116 | AAH11679.2 | |
BX640785.1 | 2 | 1698 | CAE45875.1 | |
BX640969.1 | 3 | 1578 | CAE45984.1 | |
BX640998.1 | 3 | 1578 | CAE46001.1 |
Target Gene Details
Entrez Gene ID: | 54584 |
Gene Name: | G protein subunit beta 1 like |
Gene Aliases: |
DGCRK3, FKSG1, GY2, WDR14, WDVCF |
Location: |
Chr.22:19788411-19854939 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GNB1L | NM_053004.2 | NP_443730.1 | ||
AB051432.1 | ||||
AF238328.1 | AAG36826.1 | |||
AF301895.1 | AAG53933.1 | |||
AY007378.1 | AAG12162.1 | |||
BC012060.1 | AAH12060.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv834129 | Chr.22:19705617 - 19919068 on Build GRCh38 | Loss | GP1BB SEPT5 C22orf29 TBX1 TXNRD2 SEPT5-GP1BB GNB1L |
nsv953024 | Chr.22:19842078 - 19854877 on Build GRCh38 | Deletion | C22orf29 GNB1L |
esv3893434 | Chr.22:19470889 - 20343372 on Build GRCh38 | Gain | C22orf29 TBX1 MIR1286 LOC101927859 MIR4761 COMT TRMT2A DGCR6L CLDN5 LINC00896 SEPT5-GP1BB LINC00895 LOC284865 GNB1L CDC45 MIR1306 LOC440792 MIR6816 SEPT5 UFD1L ARVCF RTN4R MIR185 ZDHHC8 GP1BB CCDC188 DGCR8 TANGO2 TXNRD2 RANBP1 MIR3618 |
nsv828939 | Chr.22:19696032 - 20324465 on Build GRCh38 | Loss | C22orf29 TBX1 MIR1286 MIR4761 COMT TRMT2A DGCR6L LINC00896 SEPT5-GP1BB LOC284865 GNB1L MIR1306 LOC440792 MIR6816 SEPT5 ARVCF RTN4R MIR185 ZDHHC8 GP1BB CCDC188 DGCR8 TANGO2 TXNRD2 RANBP1 MIR3618 |
nsv828938 | Chr.22:19691069 - 20324465 on Build GRCh38 | Gain | C22orf29 TBX1 MIR1286 MIR4761 COMT TRMT2A DGCR6L LINC00896 SEPT5-GP1BB LOC284865 GNB1L MIR1306 LOC440792 MIR6816 SEPT5 ARVCF RTN4R MIR185 ZDHHC8 GP1BB CCDC188 DGCR8 TANGO2 TXNRD2 RANBP1 MIR3618 |
nsv834130 | Chr.22:19837923 - 19940567 on Build GRCh38 | Loss | C22orf29 TXNRD2 GNB1L |
esv3568260 | Chr.22:19777375 - 19881883 on Build GRCh38 | Loss | C22orf29 TBX1 TXNRD2 GNB1L |
esv3647279 | Chr.22:19719848 - 19878980 on Build GRCh38 | Gain | GP1BB SEPT5 C22orf29 TBX1 TXNRD2 SEPT5-GP1BB GNB1L |
dgv7983n54 | Chr.22:19762002 - 20321870 on Build GRCh38 | Gain | MIR1306 LOC440792 MIR6816 C22orf29 ARVCF TBX1 MIR1286 RTN4R MIR185 ZDHHC8 MIR4761 COMT CCDC188 TRMT2A DGCR8 TANGO2 DGCR6L TXNRD2 RANBP1 MIR3618 LINC00896 LOC284865 GNB1L |
esv3575418 | Chr.22:18161776 - 19963846 on Build GRCh38 | Gain | C22orf29 DGCR11 CLTCL1 TBX1 LOC642643 USP18 GSC2 TSSK2 MIR4761 COMT TMEM191B MRPL40 LOC100996415 FAM230A CLDN5 LINC01311 DGCR2 LOC100996401 SEPT5-GP1BB LINC00895 GNB1L CDC45 C22orf39 DGCR9 SEPT5 UFD1L DGCR5 DGCR14 LOC102725072 HIRA LOC729461 PI4KAP1 GP1BB RIMBP3 SLC25A1 PRODH GGT3P LOC100996432 DGCR10 TXNRD2 DGCR6 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |