Assay Details
Target Gene Details
Entrez Gene ID: | 4849 |
Gene Name: | CCR4-NOT transcription complex subunit 3 |
Gene Aliases: |
LENG2, NOT3, NOT3H |
Location: |
Chr.19:54137689-54155708 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 15 - Intron 15 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CNOT3 | NM_014516.3 | NP_055331.1 | ||
XM_005278279.1 | XP_005278336.1 | |||
XM_005278280.2 | XP_005278337.1 | |||
XM_005278281.1 | XP_005278338.1 | |||
XM_005278282.2 | XP_005278339.1 | |||
XM_011526992.1 | XP_011525294.1 | |||
XM_011526993.2 | XP_011525295.1 | |||
AB014591.1 | ||||
AF180474.1 | AAF29828.1 | |||
AK160386.1 | BAD18729.1 | |||
AK300434.1 | ||||
AL133647.1 | CAB63766.1 | |||
BC016474.1 | AAH16474.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3644782 | Chr.19:54138064 - 54154026 on Build GRCh38 | Gain | CNOT3 |
esv3644783 | Chr.19:54151022 - 54159664 on Build GRCh38 | Gain | CNOT3 LENG1 |
nsv515623 | Chr.19:54102901 - 54179150 on Build GRCh38 | Loss | TFPT TMC4 CNOT3 MBOAT7 NDUFA3 LENG1 PRPF31 |
nsv953613 | Chr.19:54097214 - 54198733 on Build GRCh38 | Deletion | OSCAR TFPT TMC4 CNOT3 MBOAT7 TSEN34 NDUFA3 LENG1 PRPF31 |
esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion | LILRA6 LILRB2 MIR521-1 MIR371A LILRB3 LILRB5 MIR518D CACNG8 ZNF761 BIRC8 ZNF818P MIR1323 MIR518A1 MIR520A ZNF525 CACNG6 MIR520F LILRA5 MIR526B TPM3P9 VSTM1 LOC105372457 MIR516A2 MIR512-1 VN1R4 MIR516B1 TMC4 MIR518E TARM1 ZNF665 MIR524 NLRP12 MIR527 MIR520G MIR520D MIR372 MIR520B MIR512-2 MIR516A1 LOC284379 MBOAT7 ZNF813 PRKCG MIR522 MIR517A MIR519B MIR371B TSEN34 MIR516B2 LENG1 MIR517C MYADM CACNG7 CNOT3 MIR518A2 MIR498 MIR515-2 ZNF331 MIR517B MIR519D PRPF31 OSCAR MIR526A1 MIR521-2 MIR518C MIR519C MIR519A2 DPRX RPS9 ZNF765 MIR523 MIR518B MIR520E TFPT MIR519A1 FAM90A27P MIR1283-1 MIR526A2 MIR520C MIR518F MIR935 NDUFA3 MIR519E MIR1283-2 ZNF677 ZNF845 MIR373 VN1R2 MIR525 MIR515-1 MIR520H MIR4752 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |