Assay Details
Target Gene Details
Entrez Gene ID: | 79680 |
Gene Name: | chromosome 22 open reading frame 29 |
Gene Aliases: |
BOP |
Location: |
Chr.22:19846138-19854848 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
C22orf29 | NM_024627.5 | 3 | 1741 | NP_078903.3 |
AK024778.1 | 1 | 1117 | BAB14998.1 | |
AK225088.1 | ||||
AK291262.1 | 3 | 1709 | ||
AL832509.1 | 3 | 1630 | ||
BC011679.2 | 1 | 1248 | AAH11679.2 | |
BX640785.1 | 2 | 1830 | CAE45875.1 | |
BX640969.1 | 3 | 1710 | CAE45984.1 | |
BX640998.1 | 3 | 1710 | CAE46001.1 |
Target Gene Details
Entrez Gene ID: | 54584 |
Gene Name: | G protein subunit beta 1 like |
Gene Aliases: |
DGCRK3, FKSG1, GY2, WDR14, WDVCF |
Location: |
Chr.22:19788411-19854939 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GNB1L | NM_053004.2 | NP_443730.1 | ||
AB051432.1 | ||||
AF238328.1 | AAG36826.1 | |||
AF301895.1 | AAG53933.1 | |||
AY007378.1 | AAG12162.1 | |||
BC012060.1 | AAH12060.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv834129 | Chr.22:19705617 - 19919068 on Build GRCh38 | Loss | GP1BB GNB1L SEPT5-GP1BB SEPT5 C22orf29 TXNRD2 TBX1 |
nsv953024 | Chr.22:19842078 - 19854877 on Build GRCh38 | Deletion | GNB1L C22orf29 |
esv3893434 | Chr.22:19470889 - 20343372 on Build GRCh38 | Gain | LINC00896 MIR185 GNB1L CLDN5 SEPT5-GP1BB MIR4761 MIR1306 TANGO2 C22orf29 CDC45 SEPT5 RANBP1 ARVCF TBX1 DGCR8 UFD1L DGCR6L RTN4R LINC00895 LOC440792 CCDC188 GP1BB TRMT2A LOC101927859 ZDHHC8 MIR6816 LOC284865 TXNRD2 MIR3618 MIR1286 COMT |
nsv828939 | Chr.22:19696032 - 20324465 on Build GRCh38 | Loss | LINC00896 MIR185 GNB1L SEPT5-GP1BB MIR4761 MIR1306 TANGO2 C22orf29 SEPT5 RANBP1 ARVCF TBX1 DGCR8 DGCR6L RTN4R LOC440792 CCDC188 GP1BB TRMT2A ZDHHC8 MIR6816 LOC284865 TXNRD2 MIR3618 MIR1286 COMT |
nsv828938 | Chr.22:19691069 - 20324465 on Build GRCh38 | Gain | LINC00896 MIR185 GNB1L SEPT5-GP1BB MIR4761 MIR1306 TANGO2 C22orf29 SEPT5 RANBP1 ARVCF TBX1 DGCR8 DGCR6L RTN4R LOC440792 CCDC188 GP1BB TRMT2A ZDHHC8 MIR6816 LOC284865 TXNRD2 MIR3618 MIR1286 COMT |
nsv834130 | Chr.22:19837923 - 19940567 on Build GRCh38 | Loss | GNB1L C22orf29 TXNRD2 |
esv3568260 | Chr.22:19777375 - 19881883 on Build GRCh38 | Loss | GNB1L C22orf29 TXNRD2 TBX1 |
esv3647279 | Chr.22:19719848 - 19878980 on Build GRCh38 | Gain | GP1BB GNB1L SEPT5-GP1BB SEPT5 C22orf29 TXNRD2 TBX1 |
dgv7983n54 | Chr.22:19762002 - 20321870 on Build GRCh38 | Gain | LINC00896 MIR185 GNB1L DGCR8 DGCR6L MIR4761 MIR1306 TANGO2 C22orf29 RTN4R LOC440792 CCDC188 TRMT2A ZDHHC8 MIR6816 RANBP1 LOC284865 TXNRD2 ARVCF MIR3618 MIR1286 COMT TBX1 |
esv3575418 | Chr.22:18161776 - 19963846 on Build GRCh38 | Gain | GNB1L CLDN5 SEPT5-GP1BB LOC102725072 DGCR9 MIR4761 C22orf29 C22orf39 TSSK2 SLC25A1 HIRA CDC45 DGCR2 SEPT5 TMEM191B DGCR11 LOC642643 GSC2 FAM230A TBX1 LOC100996432 UFD1L GGT3P PI4KAP1 RIMBP3 USP18 LOC100996401 LOC100996415 LINC00895 MRPL40 DGCR5 GP1BB DGCR6 LOC729461 CLTCL1 DGCR14 PRODH TXNRD2 LINC01311 COMT DGCR10 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |