Assay Details
Target Gene Details
Entrez Gene ID: | 9328 |
Gene Name: | general transcription factor IIIC subunit 5 |
Gene Aliases: |
TFIIIC63, TFIIICepsilon, TFiiiC2-63 |
Location: |
Chr.9:133030675-133058503 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GTF3C5 | NM_001122823.1 | 2 | 576 | NP_001116295.1 |
NM_001286709.1 | NP_001273638.1 | |||
NM_012087.3 | 2 | 576 | NP_036219.2 | |
XM_005272234.3 | 2 | 571 | XP_005272291.1 | |
XM_011519201.1 | 2 | 304 | XP_011517503.1 | |
XM_017015315.1 | 2 | 304 | XP_016870804.1 | |
XM_017015316.1 | 2 | 304 | XP_016870805.1 | |
AF133124.1 | 2 | 531 | AAD41476.1 | |
AJ420443.1 | 2 | 244 | ||
AK000194.1 | 2 | 251 | BAA91001.1 | |
AK055092.1 | 2 | 538 | ||
AK097295.1 | 2 | 221 | BAC04993.1 | |
AK225761.1 | 2 | 543 | ||
AK293980.1 | ||||
AK311481.1 | ||||
AY007123.1 | 2 | 240 | AAG01991.1 | |
BC009741.2 | AAH09741.2 | |||
BC011355.1 | 2 | 520 | AAH11355.1 | |
BC017337.2 | 2 | 499 | AAH17337.1 | |
BC030157.2 | 2 | 234 | AAH30157.2 | |
BQ673969.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | COL5A1-AS1 AK8 SURF2 GTF3C5 MIR3689B MIR3689E LOC401557 TSC1 CEL SNORD24 DBH MRPS2 DBH-AS1 SNORD36C RALGDS C9orf116 SURF6 REXO4 FAM163B SLC2A6 SNORD36A ABO LINC00094 FCN2 MIR6877 SNORD36B CACFD1 MIR3689C TMEM8C ADAMTS13 SURF1 GBGT1 LOC101928525 C9orf62 RPL7A LOC101928193 MIR3689F ADAMTSL2 STKLD1 BRD3 SURF4 RNU6ATAC CELP SNORD141A MIR548AW LOC105376306 VAV2 COL5A1 SPACA9 OBP2B MIR3689D2 RXRA PPP1R26-AS1 LOC100130548 WDR5 FCN1 MIR3689A PPP1R26 LCN1 SARDH MED22 MIR4669 MIR3689D1 OLFM1 LOC101448202 LOC100996574 GFI1B |
nsv615596 | Chr.9:133030314 - 133080285 on Build GRCh38 | Loss | LOC105376306 CEL MIR6877 LOC100996574 GTF3C5 |
nsv831744 | Chr.9:132980050 - 133174043 on Build GRCh38 | Gain+Loss | LOC105376306 RALGDS GBGT1 CEL MIR6877 LOC100996574 GTF3C5 CELP SNORD141A GFI1B |
nsv508564 | Chr.9:133013830 - 133073076 on Build GRCh38 | Deletion | LOC105376306 CEL MIR6877 LOC100996574 GTF3C5 SNORD141A |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |