Assay Details
Target Gene Details
Entrez Gene ID: | 56114 |
Gene Name: | protocadherin gamma subfamily A, 1 |
Gene Aliases: |
PCDH-GAMMA-A1 |
Location: |
Chr.5:141330685-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA1 | NM_018912.2 | NP_061735.1 | ||
AF152318.1 | AAD43712.1 |
Target Gene Details
Entrez Gene ID: | 56113 |
Gene Name: | protocadherin gamma subfamily A, 2 |
Gene Aliases: |
PCDH-GAMMA-A2 |
Location: |
Chr.5:141338760-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA2 | NM_018915.3 | NP_061738.1 | ||
AF152322.1 | AAD43716.1 |
Target Gene Details
Entrez Gene ID: | 56112 |
Gene Name: | protocadherin gamma subfamily A, 3 |
Gene Aliases: |
PCDH-GAMMA-A3 |
Location: |
Chr.5:141344034-141512979 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA3 | NM_018916.3 | NP_061739.2 | ||
NM_032011.1 | NP_114400.1 | |||
AB208927.1 | 1 | 181 | BAD92164.1 | |
AF152323.1 | AAD43717.1 | |||
AF152510.1 | AAD43770.1 | |||
BC115408.1 | ||||
BC115409.1 | ||||
BC133708.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3606980 | Chr.5:141341467 - 141345266 on Build GRCh38 | Loss | PCDHGA2 PCDHGA3 PCDHGA1 |
esv2759382 | Chr.5:140777355 - 141449115 on Build GRCh38 | Gain | PCDHGB7 PCDHB3 PCDHA13 PCDHB7 PCDHA6 PCDHA2 PCDHB18P PCDHGA2 PCDHB4 PCDHA1 PCDHB5 PCDHGA8 PCDHGA4 PCDHA5 PCDHB8 PCDHGA11 PCDHB16 PCDHAC2 PCDHB12 PCDHB1 PCDHGB4 PCDHGA5 PCDHA7 PCDHGA3 PCDHA12 PCDHB13 PCDHB10 PCDHA3 PCDHB15 PCDHGB2 SLC25A2 PCDHA9 TAF7 PCDHGB5 PCDHB9 PCDHB19P PCDHA11 PCDHGA12 PCDHGB8P PCDHA4 PCDHA10 PCDHB14 PCDHGA1 PCDHGB3 PCDHGA9 PCDHB11 PCDHGB1 PCDHGB6 PCDHB17P PCDHGA10 LOC101926905 PCDHAC1 PCDHB2 PCDHB6 PCDHGA6 PCDHGA7 PCDHA8 |
esv3570470 | Chr.5:141337905 - 141348151 on Build GRCh38 | Loss | PCDHGA2 PCDHGA3 PCDHGA1 |
nsv599922 | Chr.5:141341879 - 141416532 on Build GRCh38 | Loss | PCDHGA3 PCDHGA1 PCDHGA8 PCDHGA4 PCDHGB3 PCDHGA9 PCDHGB1 PCDHGB6 PCDHGB2 PCDHGA2 PCDHGA10 PCDHGB5 PCDHGA6 PCDHGA7 PCDHGB4 PCDHGA5 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |