Assay Details
Target Gene Details
Entrez Gene ID: | 83986 |
Gene Name: | family with sequence similarity 234 member A |
Gene Aliases: |
C16orf9, ITFG3, gs19 |
Location: |
Chr.16:234546-269943 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 5 - Intron 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
FAM234A | NM_001284497.1 | NP_001271426.1 | ||
NM_032039.3 | NP_114428.1 | |||
NR_104317.1 | ||||
XM_005255622.1 | XP_005255679.1 | |||
XM_005255623.2 | XP_005255680.1 | |||
XM_006720957.1 | XP_006721020.1 | |||
XM_011522691.1 | XP_011520993.1 | |||
XM_011522692.1 | XP_011520994.1 | |||
XM_017023760.1 | XP_016879249.1 | |||
XM_017023761.1 | XP_016879250.1 | |||
XM_017023762.1 | XP_016879251.1 | |||
XM_017023763.1 | XP_016879252.1 | |||
XM_017023764.1 | XP_016879253.1 | |||
XM_017023765.1 | XP_016879254.1 | |||
AK057165.1 | BAB71374.1 | |||
AK294581.1 | ||||
AK310766.1 | ||||
AL136542.1 | CAB66477.1 | |||
BC013047.1 | AAH13047.1 | |||
BC032112.2 | AAH32112.1 | |||
CN262982.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv518291 | Chr.16:47354 - 254515 on Build GRCh38 | Loss | LUC7L MPG POLR3K NPRL3 FAM234A HBA2 SNRNP25 HBZ HBA1 RHBDF1 HBM HBQ1 |
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | TELO2 CACNA1H RAB26 PKD1 ATP6V0C HBA1 E4F1 RPUSD1 MIR3180-5 CCDC78 MAPK8IP3 SSTR5 LOC107984876 LOC100134368 NME4 TBC1D24 LMF1 PDPK1 MIR4516 MLST8 PDIA2 RAB40C PRSS27 ABCA17P MIR3176 SNORA64 LOC105371184 MIR3178 LOC105371045 PGP FAM234A WFIKKN1 NHLRC4 CASKIN1 NUBP2 AXIN1 METTL26 HAGH NOXO1 TPSB2 IFT140 BAIAP3 FBXL16 HAGHL CHTF18 UNKL MIR6859-4 SNORA10 MIR6767 CLCN7 WDR24 CAPN15 LOC100287175 PRSS29P MIR940 LOC106660606 MSLN LOC105371047 MIR3677 GNG13 CCDC154 C16orf91 TRAF7 GFER RPL3L SOX8 HBA2 NDUFB10 TPSG1 SNHG9 HS3ST6 RGS11 CEMP1 RPS2 WASIR2 RNF151 SLC9A3R2 ERVK13-1 ABCA3 TPSAB1 SNRNP25 MIR5587 NARFL SNORD60 LOC101929280 KCTD5 TMEM204 JMJD8 NTN3 HBM FAHD1 DNASE1L2 ZNF598 PTX4 RNPS1 HBZ PIGQ SSTR5-AS1 TSC2 IGFALS MRPL28 STUB1 PRR25 LUC7L SYNGR3 MIR6511B1 TMEM8A DECR2 LOC105371046 SNORA78 TBL3 LINC00235 MSRB1 WDR90 FAM173A NTHL1 MPG CCNF LOC107987233 METRN TPSD1 LOC105371049 ARHGDIG MIR662 MIR1225 MIR6768 FLJ42627 RAB11FIP3 LINC00254 MRPS34 CRAMP1 MCRIP2 POLR3K LOC105371038 RHBDF1 UBE2I LMF1-AS1 HBQ1 EME2 C1QTNF8 NPRL3 ECI1 SPSB3 BRICD5 LOC652276 NPW RHOT2 GNPTG NME3 SNHG19 PRR35 C16orf59 RHBDL1 MIR3177 AMDHD2 RPL23AP5 LOC729652 MIR4717 DDX11L10 TSR3 MEIOB HN1L |
esv3570031 | Chr.16:243389 - 278107 on Build GRCh38 | Gain | FAM234A RGS11 |
nsv1044142 | Chr.16:10765 - 255644 on Build GRCh38 | Gain | MPG NPRL3 SNRNP25 HBZ HBA1 MIR6859-4 LUC7L POLR3K FAM234A HBA2 DDX11L10 RHBDF1 HBM WASIR2 HBQ1 |
esv2667528 | Chr.16:246450 - 249976 on Build GRCh38 | Deletion | FAM234A |
esv3637560 | Chr.16:246387 - 250231 on Build GRCh38 | Loss | FAM234A |
dgv32n68 | Chr.16:245507 - 476226 on Build GRCh38 | Loss | LOC100134368 NME4 FAM234A TMEM8A ARHGDIG RPL23AP5 DECR2 AXIN1 RAB11FIP3 RGS11 PDIA2 MRPL28 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |