Assay Details
Target Gene Details
Entrez Gene ID: | 51380 |
Gene Name: | cysteine sulfinic acid decarboxylase |
Gene Aliases: |
CSD, PCAP |
Location: |
Chr.12:53157663-53180909 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 9 - Intron 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CSAD | NM_001244705.1 | NP_001231634.1 | ||
NM_015989.4 | NP_057073.4 | |||
XM_011538442.2 | XP_011536744.2 | |||
XM_011538446.2 | XP_011536748.1 | |||
XM_011538449.1 | XP_011536751.1 | |||
XM_011538451.1 | XP_011536753.1 | |||
XM_017019416.1 | XP_016874905.1 | |||
XM_017019417.1 | XP_016874906.1 | |||
XM_017019418.1 | XP_016874907.1 | |||
XM_017019419.1 | XP_016874908.1 | |||
AF116545.1 | AAD32543.1 | |||
AF116546.1 | AAD32544.1 | |||
AF116547.1 | AAD32545.1 | |||
AF116548.1 | AAD32546.1 | |||
AK122681.1 | ||||
AK128796.1 | ||||
AK289659.1 | ||||
AK315265.1 | ||||
BC052249.1 | AAH52249.1 | |||
BC098278.1 | AAH98278.1 | |||
BC098342.1 | AAH98342.1 | |||
BC099717.1 | AAH99717.1 | |||
BC105918.1 | AAI05919.1 | |||
DA687716.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv832417 | Chr.12:53075874 - 53254231 on Build GRCh38 | Gain | SOAT2 ZNF740 SPRYD3 CSAD ITGB7 RARG IGFBP6 MFSD5 |
nsv558994 | Chr.12:53103618 - 53277765 on Build GRCh38 | Loss | SOAT2 ZNF740 CSAD ESPL1 ITGB7 RARG MFSD5 |
dgv2645n54 | Chr.12:53099603 - 53227927 on Build GRCh38 | Loss | SOAT2 ZNF740 CSAD ITGB7 RARG IGFBP6 |
nsv517066 | Chr.12:53006394 - 53340722 on Build GRCh38 | Loss | MIR6757 CSAD ESPL1 AAAS PFDN5 TNS2 RARG EIF4B IGFBP6 MFSD5 SP7 SOAT2 LOC283335 ZNF740 SPRYD3 ITGB7 C12orf10 |
nsv469404 | Chr.12:53124036 - 53227927 on Build GRCh38 | Loss | SOAT2 ZNF740 CSAD ITGB7 RARG |
dgv2644n54 | Chr.12:53064109 - 53211560 on Build GRCh38 | Loss | SOAT2 ZNF740 SPRYD3 CSAD TNS2 ITGB7 RARG IGFBP6 |
More Information
Additional Information:
For this assay, SNP(s) [rs80280748] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |