Assay Details
Target Gene Details
Entrez Gene ID: | 83855 |
Gene Name: | Kruppel like factor 16 |
Gene Aliases: |
BTEB4, DRRF, NSLP2 |
Location: |
Chr.19:1852399-1863565 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 1 - Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
KLF16 | NM_031918.3 | NP_114124.1 | ||
AF327440.1 | AAK15698.1 | |||
CV809534.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3893156 | Chr.19:1766738 - 2115791 on Build GRCh38 | Loss | SCAMP4 ONECUT3 BTBD2 REXO1 IZUMO4 MOB3A CSNK1G2 ABHD17A ADAT3 LOC100288123 ATP8B3 KLF16 AP3D1 MIR1909 MKNK2 CSNK1G2-AS1 |
esv2669985 | Chr.19:1852046 - 1864993 on Build GRCh38 | Deletion | KLF16 |
esv32942 | Chr.19:1320268 - 1999205 on Build GRCh38 | Gain+Loss | BTBD2 REXO1 PCSK4 CSNK1G2 ABHD17A LOC100288123 KLF16 NDUFS7 MBD3 APC2 CSNK1G2-AS1 SCAMP4 ONECUT3 MEX3D ADAMTSL5 TCF3 GAMT DAZAP1 C19orf25 ADAT3 ATP8B3 MIR1909 REEP6 UQCR11 PLK5 MUM1 RPS15 |
nsv470107 | Chr.19:1782799 - 2100347 on Build GRCh38 | Loss | SCAMP4 BTBD2 REXO1 IZUMO4 MOB3A CSNK1G2 ABHD17A ADAT3 LOC100288123 ATP8B3 KLF16 MIR1909 MKNK2 CSNK1G2-AS1 |
nsv1160560 | Chr.19:1791100 - 1916393 on Build GRCh38 | Deletion | SCAMP4 ABHD17A ADAT3 LOC100288123 ATP8B3 REXO1 KLF16 MIR1909 |
nsv578338 | Chr.19:1847699 - 1869095 on Build GRCh38 | Loss | REXO1 KLF16 |
nsv578337 | Chr.19:1808864 - 1904613 on Build GRCh38 | Gain | ABHD17A LOC100288123 ATP8B3 REXO1 KLF16 MIR1909 |
nsv953942 | Chr.19:1371602 - 2057401 on Build GRCh38 | Deletion | BTBD2 REXO1 PCSK4 CSNK1G2 ABHD17A LOC100288123 KLF16 NDUFS7 MBD3 APC2 CSNK1G2-AS1 SCAMP4 ONECUT3 MEX3D ADAMTSL5 TCF3 GAMT DAZAP1 C19orf25 ADAT3 ATP8B3 MIR1909 REEP6 UQCR11 PLK5 MKNK2 MUM1 RPS15 |
esv2660894 | Chr.19:1854446 - 1872693 on Build GRCh38 | Deletion | KLF16 |
More Information
Additional Information:
For this assay, SNP(s) [rs76157530] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Non-exonic DGV Variation |