Assay Details
Target Gene Details
Entrez Gene ID: | 123811 |
Gene Name: | FGFR1OP N-terminal like |
Gene Aliases: |
C16orf63, FOR20, PHSECRG2 |
Location: |
Chr.16:15865719-15888649 on Build GRCh38 |
Assay Gene Location: | Within Exon 6 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
FOPNL | NM_001304497.1 | 3 | 1160 | NP_001291426.1 |
NM_001304498.1 | 4 | 1245 | NP_001291427.1 | |
NM_001304499.1 | 6 | 1454 | NP_001291428.1 | |
NM_001304500.1 | 4 | 1184 | NP_001291429.1 | |
NM_001304502.1 | 5 | 1317 | NP_001291431.1 | |
NM_144600.3 | 5 | 1382 | NP_653201.1 | |
NR_130755.1 | 4 | 1297 | ||
NR_130756.1 | 6 | 1482 | ||
NR_130757.1 | 3 | 1099 | ||
AK055715.1 | 5 | 1325 | BAB70994.1 | |
AK056798.1 | 3 | 1113 | ||
AL832498.1 | 5 | 1345 | ||
AY507846.1 | 5 | 1338 | AAR98812.1 | |
BC022321.1 | 5 | 1333 | AAH22321.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv435664 | Chr.16:15247194 - 18197960 on Build GRCh38 | Deletion | NDE1 PKD1P1 NPIPA7 MYH11 XYLT1 MIR3180-2 MIR6511A2 PKD1P2 MIR3670-2 FOPNL MIR3179-2 MIR6506 MIR6770-2 C16orf45 ABCC6 NOMO3 LOC102723692 MIR6511A3 NPIPA5 MIR484 ABCC1 KIAA0430 MPV17L |
nsv471085 | Chr.16:15847168 - 15931893 on Build GRCh38 | Gain | MYH11 FOPNL |
nsv833149 | Chr.16:15815546 - 15979954 on Build GRCh38 | Loss | MYH11 FOPNL ABCC1 |
nsv1047898 | Chr.16:15388065 - 18284986 on Build GRCh38 | Loss | NDE1 PKD1P1 NPIPA7 MYH11 XYLT1 MIR3180-2 MIR6511A2 PKD1P2 MIR3670-2 FOPNL MIR3179-2 MIR6506 MIR6770-2 C16orf45 ABCC6 NOMO3 LOC102723692 MIR6511A3 MIR484 ABCC1 KIAA0430 MPV17L |
nsv457428 | Chr.16:15386022 - 18071186 on Build GRCh38 | Gain | NDE1 PKD1P1 NPIPA7 MYH11 XYLT1 MIR3180-2 MIR6511A2 PKD1P2 MIR3670-2 FOPNL MIR3179-2 MIR6506 MIR6770-2 C16orf45 ABCC6 NOMO3 LOC102723692 MIR6511A3 MIR484 ABCC1 KIAA0430 MPV17L |
nsv1125134 | Chr.16:15180201 - 18091718 on Build GRCh38 | Deletion | NDE1 PKD1P1 NPIPA7 MYH11 XYLT1 MIR3180-2 MIR6511A2 PKD1P2 MIR3670-2 FOPNL MIR3179-2 MIR6506 MIR6770-2 C16orf45 ABCC6 NOMO3 LOC102723692 MIR6511A3 NPIPA5 MIR484 ABCC1 KIAA0430 MPV17L |
esv3638041 | Chr.16:15702756 - 16002857 on Build GRCh38 | Gain | NDE1 MYH11 FOPNL ABCC1 |
esv2714015 | Chr.16:15292092 - 18247911 on Build GRCh38 | Deletion | NDE1 PKD1P1 NPIPA7 MYH11 XYLT1 MIR3180-2 MIR6511A2 PKD1P2 MIR3670-2 FOPNL MIR3179-2 MIR6506 MIR6770-2 C16orf45 ABCC6 NOMO3 LOC102723692 MIR6511A3 NPIPA5 MIR484 ABCC1 KIAA0430 MPV17L |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |