Assay Details
Target Gene Details
Entrez Gene ID: | 56114 |
Gene Name: | protocadherin gamma subfamily A, 1 |
Gene Aliases: |
PCDH-GAMMA-A1 |
Location: |
Chr.5:141330685-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA1 | NM_018912.2 | NP_061735.1 | ||
AF152318.1 | AAD43712.1 |
Target Gene Details
Entrez Gene ID: | 56113 |
Gene Name: | protocadherin gamma subfamily A, 2 |
Gene Aliases: |
PCDH-GAMMA-A2 |
Location: |
Chr.5:141338760-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA2 | NM_018915.3 | NP_061738.1 | ||
AF152322.1 | AAD43716.1 |
Target Gene Details
Entrez Gene ID: | 56112 |
Gene Name: | protocadherin gamma subfamily A, 3 |
Gene Aliases: |
PCDH-GAMMA-A3 |
Location: |
Chr.5:141344034-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA3 | NM_018916.3 | NP_061739.2 | ||
AB208927.1 | BAD92164.1 | |||
AF152323.1 | AAD43717.1 |
Target Gene Details
Entrez Gene ID: | 56111 |
Gene Name: | protocadherin gamma subfamily A, 4 |
Gene Aliases: |
PCDH-GAMMA-A4 |
Location: |
Chr.5:141355025-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA4 | NM_018917.3 | NP_061740.2 | ||
AF152324.1 | AAD43718.1 |
Target Gene Details
Entrez Gene ID: | 56104 |
Gene Name: | protocadherin gamma subfamily B, 1 |
Gene Aliases: |
PCDH-GAMMA-B1 |
Location: |
Chr.5:141350261-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB1 | NM_018922.2 | NP_061745.1 | ||
AF152330.1 | AAD43724.1 |
Target Gene Details
Entrez Gene ID: | 56103 |
Gene Name: | protocadherin gamma subfamily B, 2 |
Gene Aliases: |
PCDH-GAMMA-B2 |
Location: |
Chr.5:141360136-141512979 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB2 | NM_018923.2 | 1 | 813 | NP_061746.1 |
NM_032096.1 | 1 | 813 | NP_115267.1 | |
AF152331.1 | 1 | 813 | AAD43725.1 | |
AF152518.1 | 1 | 813 | AAD43778.1 | |
BC101805.1 | 1 | 876 | AAI01806.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759382 | Chr.5:140777355 - 141449115 on Build GRCh38 | Gain | PCDHA2 PCDHA13 PCDHA9 PCDHA3 PCDHGA5 PCDHGA1 PCDHB14 PCDHB1 PCDHGA9 PCDHA4 PCDHGA12 PCDHGB3 PCDHB13 SLC25A2 PCDHAC2 PCDHB18P PCDHA10 PCDHGA2 PCDHGA10 PCDHGB5 PCDHGB4 PCDHA11 PCDHB5 PCDHB17P PCDHA6 PCDHGB6 PCDHB8 LOC101926905 PCDHB4 PCDHB6 PCDHB19P PCDHGA4 PCDHB16 PCDHGA11 PCDHGA3 PCDHA8 PCDHA5 PCDHB12 PCDHGA6 PCDHGB1 PCDHAC1 PCDHB9 PCDHGB7 PCDHA7 PCDHB15 PCDHB3 PCDHA1 PCDHGB8P TAF7 PCDHGA8 PCDHA12 PCDHB11 PCDHGB2 PCDHB7 PCDHB2 PCDHGA7 PCDHB10 |
esv3606982 | Chr.5:141352280 - 141361411 on Build GRCh38 | Loss | PCDHGA2 PCDHGA1 PCDHGB2 PCDHGB1 PCDHGA4 PCDHGA3 |
nsv599922 | Chr.5:141341879 - 141416532 on Build GRCh38 | Loss | PCDHGA8 PCDHGA2 PCDHGA5 PCDHGA10 PCDHGB5 PCDHGA1 PCDHGB4 PCDHGB2 PCDHGA3 PCDHGB6 PCDHGA9 PCDHGA7 PCDHGA6 PCDHGB1 PCDHGB3 PCDHGA4 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |