Assay Details
Target Gene Details
Entrez Gene ID: | 27043 |
Gene Name: | proline, glutamate and leucine rich protein 1 |
Gene Aliases: |
MNAR, P160 |
Location: |
Chr.17:4671384-4704337 on Build GRCh38 |
Assay Gene Location: | Within Exon 17 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PELP1 | NM_001278241.1 | 17 | 2427 | NP_001265170.1 |
NM_014389.2 | 16 | 2345 | NP_055204.3 | |
AF547989.1 | 16 | 2119 | AAN41255.1 | |
AK226056.1 | 16 | 2125 | ||
AK291163.1 | 16 | 2145 | ||
AK293838.1 | 17 | 2214 | ||
AK299084.1 | 16 | 2333 | ||
AY882602.1 | 16 | 1912 | AAW80659.1 | |
BC002875.2 | 6 | 960 | AAH02875.2 | |
BC010457.2 | 15 | 1873 | AAH10457.2 | |
BC069058.1 | 16 | 2119 | AAH69058.1 | |
U88153.2 | 15 | 2554 | AAC17708.2 | |
U88154.1 | 15 | 1770 | AAC17709.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv574273 | Chr.17:4585589 - 5460332 on Build GRCh38 | Gain | CXCL16 MIR6864 C17orf107 GLTPD2 PSMB6 LOC400568 INCA1 LOC101927979 LOC100130950 KIF1C PELP1 NUP88 LOC102724009 PLD2 ARRB2 VMO1 ZNF232 RPAIN SLC52A1 GP1BA CHRNE LOC107984973 DHX33 ALOX15 SPAG7 MIR6865 MINK1 RNF167 PFN1 ZFP3 LOC101928000 SMTNL2 ZNF594 RABEP1 C1QBP ZMYND15 ENO3 SCIMP LOC101559451 USP6 MED11 CAMTA2 SLC25A11 TM4SF5 |
nsv833346 | Chr.17:4646256 - 4860871 on Build GRCh38 | Loss | CXCL16 MINK1 GLTPD2 PSMB6 ZMYND15 PELP1 LOC101559451 PLD2 MED11 ARRB2 VMO1 LOC107984973 TM4SF5 |
More Information
Additional Information:
For this assay, SNP(s) [rs147763003] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |