Assay Details
Target Gene Details
Entrez Gene ID: | 54910 |
Gene Name: | semaphorin 4C |
Gene Aliases: |
M-SEMA-F, SEMACL1, SEMAF, SEMAI |
Location: |
Chr.2:96859736-96870943 on Build GRCh38 |
Assay Gene Location: | Within Exon 13 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SEMA4C | NM_017789.4 | 11 | 1331 | NP_060259.4 |
XM_006712606.3 | 11 | 1435 | XP_006712669.2 | |
XM_011511378.2 | 11 | 1439 | XP_011509680.1 | |
XM_011511379.2 | 11 | 1436 | XP_011509681.1 | |
XM_011511380.1 | 11 | 1774 | XP_011509682.1 | |
XM_011511381.1 | 11 | 1408 | XP_011509683.1 | |
XM_011511382.2 | 11 | 1367 | XP_011509684.1 | |
XM_011511383.1 | 11 | 1379 | XP_011509685.1 | |
XM_017004393.1 | 10 | 1861 | XP_016859882.1 | |
XM_017004394.1 | 9 | 983 | XP_016859883.1 | |
AB051526.1 | 9 | 1561 | BAB21830.1 | |
AK000376.1 | 3 | 271 | BAA91124.1 | |
AY358842.1 | 11 | 1304 | AAQ89201.1 | |
BC017476.1 | 5 | 607 | AAH17476.2 | |
BC062984.1 | 3 | 303 | AAH62984.1 | |
BC109103.1 | 11 | 1260 | AAI09104.1 | |
BC109104.1 | 11 | 1257 | AAI09105.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv526313 | Chr.2:96667755 - 96994882 on Build GRCh38 | Loss | SEMA4C MIR3127 FAM178B CNNM4 LOC101927053 FER1L5 CNNM3 LMAN2L ANKRD39 ANKRD23 |
dgv607e201 | Chr.2:95855884 - 97561622 on Build GRCh38 | Deletion | SEMA4C ASTL NCAPH DUSP2 ADRA2B STARD7 LOC100506076 FAHD2B CNNM3 LOC100506123 LOC105373496 FAHD2CP SNRNP200 LOC653924 ANKRD23 ANKRD36B LOC105373495 FAM178B CNNM4 LOC101927053 FER1L5 ARID5A NEURL3 KANSL3 MIR3127 LOC107984110 STARD7-AS1 GPAT2 ANKRD36 TMEM127 ITPRIPL1 LMAN2L ANKRD39 CIAO1 ANKRD36C |
nsv1135873 | Chr.2:95981454 - 97579645 on Build GRCh38 | Deletion | SEMA4C ASTL NCAPH DUSP2 ADRA2B STARD7 LOC100506076 FAHD2B CNNM3 LOC100506123 LOC105373496 FAHD2CP SNRNP200 LOC653924 ANKRD23 ANKRD36B LOC105373495 FAM178B CNNM4 LOC101927053 FER1L5 ARID5A NEURL3 KANSL3 MIR3127 LOC107984110 STARD7-AS1 GPAT2 ANKRD36 TMEM127 ITPRIPL1 LMAN2L ANKRD39 CIAO1 ANKRD36C |
esv3425717 | Chr.2:95859900 - 97515905 on Build GRCh38 | Duplication | SEMA4C ASTL NCAPH DUSP2 ADRA2B STARD7 LOC100506076 FAHD2B CNNM3 LOC100506123 LOC105373496 FAHD2CP SNRNP200 LOC653924 ANKRD23 ANKRD36B LOC105373495 FAM178B CNNM4 LOC101927053 FER1L5 ARID5A NEURL3 KANSL3 MIR3127 LOC107984110 STARD7-AS1 GPAT2 ANKRD36 TMEM127 ITPRIPL1 LMAN2L ANKRD39 CIAO1 ANKRD36C |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |