Assay Details
Target Gene Details
Entrez Gene ID: | 100289580 |
Gene Name: | uncharacterized LOC100289580 |
Gene Aliases: |
- |
Location: |
Chr.16:88731180-88741425 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LOC100289580 | NR_103774.1 | |||
AK294743.1 |
Target Gene Details
Entrez Gene ID: | 9780 |
Gene Name: | piezo type mechanosensitive ion channel component 1 |
Gene Aliases: |
DHS, FAM38A, LMPH3, Mib |
Location: |
Chr.16:88715338-88785220 on Build GRCh38 |
Assay Gene Location: | Within Exon 19 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PIEZO1 | NM_001142864.3 | 19 | 2824 | NP_001136336.2 |
AB161230.1 | 8 | 1275 | BAF03565.1 | |
BC150271.1 | 8 | 1112 | ||
D87071.1 | 8 | 1112 | BAA13240.1 | |
KC602455.1 | 19 | 2568 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1063024 | Chr.16:88707330 - 89238482 on Build GRCh38 | Gain | CTU2 LINC00304 CDT1 LOC339059 LOC100289580 LOC100129697 LOC101927793 CDH15 ZNF778 SLC22A31 APRT CBFA2T3 LOC105371409 MIR4722 LOC400558 GALNS TRAPPC2L PIEZO1 ACSF3 LOC107987238 PABPN1L |
nsv471114 | Chr.16:88688461 - 88756339 on Build GRCh38 | Gain | CTU2 MIR4722 RNF166 LOC339059 LOC100289580 PIEZO1 |
nsv471113 | Chr.16:88650665 - 88764428 on Build GRCh38 | Loss | CTU2 CYBA MIR4722 RNF166 LOC339059 LOC100289580 PIEZO1 SNAI3-AS1 SNAI3 MVD |
dgv3064n100 | Chr.16:88683753 - 88846491 on Build GRCh38 | Gain | APRT CTU2 MIR4722 RNF166 CDT1 LOC339059 GALNS LOC100289580 PIEZO1 SNAI3-AS1 SNAI3 LOC107987238 |
nsv517643 | Chr.16:88713767 - 88756339 on Build GRCh38 | Loss | CTU2 MIR4722 LOC339059 LOC100289580 PIEZO1 |
nsv573673 | Chr.16:88721265 - 88735362 on Build GRCh38 | Loss | LOC100289580 PIEZO1 |
nsv833327 | Chr.16:88667431 - 88757621 on Build GRCh38 | Loss | CTU2 MIR4722 RNF166 LOC339059 LOC100289580 PIEZO1 SNAI3-AS1 SNAI3 |
nsv952070 | Chr.16:88257295 - 88780192 on Build GRCh38 | Deletion | CTU2 MIR5189 IL17C CYBA LOC339059 LOC100289580 LOC107984862 ZC3H18 ZFPM1 MVD ZC3H18-AS1 MIR4722 RNF166 ZNF469 PIEZO1 SNAI3-AS1 SNAI3 |
nsv1927 | Chr.16:88712585 - 88743583 on Build GRCh38 | Insertion | CTU2 MIR4722 LOC339059 LOC100289580 PIEZO1 |
nsv1160442 | Chr.16:88708161 - 88778524 on Build GRCh38 | Deletion | CTU2 MIR4722 LOC339059 LOC100289580 PIEZO1 |
nsv482951 | Chr.16:88633593 - 90228345 on Build GRCh38 | Loss | SNORD68 URAHP SPG7 CDT1 LOC100289580 LOC100129697 FANCA LOC105371414 ZNF778 SLC22A31 PRDM7 LOC400558 TRAPPC2L LOC101927817 SNAI3 DBNDD1 DEF8 LOC105371419 SPATA2L IL17C MC1R DPEP1 CDH15 LOC107984817 MVD GAS8 PIEZO1 LOC107987238 GAS8-AS1 TUBB8P7 TUBB3 CTU2 LOC339059 RPL13 LOC101927793 TCF25 LOC105371409 CENPBD1 MIR4722 CPNE7 CHMP1A SNAI3-AS1 LOC100287036 PABPN1L LINC00304 CYBA VPS9D1 SPIRE2 ZNF276 ANKRD11 APRT CBFA2T3 RNF166 GALNS CDK10 FAM157C ACSF3 AFG3L1P VPS9D1-AS1 SPATA33 |
dgv3065n100 | Chr.16:88711587 - 88927172 on Build GRCh38 | Gain | CTU2 CDT1 LOC339059 LOC100289580 LOC101927793 APRT CBFA2T3 MIR4722 GALNS TRAPPC2L PIEZO1 LOC107987238 PABPN1L |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |