Assay Details
Target Gene Details
Entrez Gene ID: | 59307 |
Gene Name: | single Ig and TIR domain containing |
Gene Aliases: |
IL-1R8, TIR8 |
Location: |
Chr.11:405716-417454 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 5 - Exon 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SIGIRR | NM_001135053.1 | NP_001128525.1 | ||
NM_001135054.1 | NP_001128526.1 | |||
NM_021805.2 | NP_068577.2 | |||
XM_005253044.2 | XP_005253101.1 | |||
XM_005253045.1 | XP_005253102.1 | |||
XM_005253046.1 | XP_005253103.1 | |||
XM_005253048.4 | XP_005253105.1 | |||
XM_017018099.1 | XP_016873588.1 | |||
XM_017018100.1 | XP_016873589.1 | |||
AK025099.1 | BAB15066.1 | |||
AK093427.1 | ||||
AK172830.1 | BAD18795.1 | |||
AY358342.1 | AAQ88708.1 | |||
BC003591.1 | AAH03591.1 | |||
BC025953.1 | AAH25953.1 | |||
BC106007.1 | AAI06008.1 | |||
CR457338.1 | CAG33619.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | LOC101059906 LOC143666 IFITM5 PGGHG RASSF7 HRAS PHRF1 PTDSS2 RNH1 PKP3 LRRC56 CDHR5 LMNTD2 IFITM1 ANO9 MIR210 IFITM3 B4GALNT4 IFITM2 SIGIRR MIR210HG IRF7 |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | RASSF7 MUC6 PDDC1 DRD4 HRAS AP2A2 CHID1 TOLLIP PTDSS2 RNH1 TMEM80 PIDD1 PKP3 LRRC56 CD151 ANO9 RPLP2 B4GALNT4 SNORA52 LOC171391 SIGIRR IRF7 LOC101059906 LOC143666 MUC5B TALDO1 DEAF1 PHRF1 CRACR2B MUC2 TSPAN4 CDHR5 LMNTD2 SCT POLR2L LOC101927503 EPS8L2 PANO1 MIR210 SLC25A22 CEND1 MUC5AC PNPLA2 MIR210HG MIR6744 |
nsv552776 | Chr.11:366710 - 432436 on Build GRCh38 | Loss | ANO9 B4GALNT4 PKP3 SIGIRR |
nsv951268 | Chr.11:368601 - 503700 on Build GRCh38 | Deletion | ANO9 B4GALNT4 PTDSS2 RNH1 PKP3 SIGIRR |
nsv552770 | Chr.11:356090 - 444628 on Build GRCh38 | Gain | ANO9 B4GALNT4 PKP3 SIGIRR |
dgv1505n54 | Chr.11:198510 - 470331 on Build GRCh38 | Gain | IFITM5 PGGHG RIC8A PSMD13 BET1L PTDSS2 MIR6743 PKP3 IFITM1 ANO9 IFITM3 B4GALNT4 ODF3 IFITM2 NLRP6 SIGIRR SIRT3 |
nsv1159790 | Chr.11:340219 - 491334 on Build GRCh38 | Deletion | ANO9 B4GALNT4 PTDSS2 PKP3 SIGIRR |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | RASSF7 PDDC1 DRD4 HRAS AP2A2 CHID1 PTDSS2 RNH1 TMEM80 PIDD1 PKP3 LRRC56 CD151 ANO9 RPLP2 B4GALNT4 SNORA52 LOC171391 SIGIRR IRF7 LOC101059906 LOC143666 TALDO1 DEAF1 PHRF1 CRACR2B TSPAN4 CDHR5 LMNTD2 SCT POLR2L EPS8L2 PANO1 MIR210 SLC25A22 CEND1 PNPLA2 MIR210HG |
nsv552822 | Chr.11:403545 - 408352 on Build GRCh38 | Loss | PKP3 SIGIRR |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |