Assay Details
Target Gene Details
Entrez Gene ID: | 7053 |
Gene Name: | transglutaminase 3 |
Gene Aliases: |
TGE |
Location: |
Chr.20:2295967-2341079 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 1 - Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TGM3 | NM_003245.3 | NP_003236.3 | ||
AK290324.1 | ||||
AK291351.1 | ||||
AK298637.1 | ||||
AK299447.1 | ||||
AK308249.1 | ||||
AK315236.1 | ||||
AL602787.1 | ||||
BC109075.1 | AAI09076.1 | |||
BC109076.1 | AAI09077.1 | |||
DC373633.1 | ||||
L10386.1 | AAA61155.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3645006 | Chr.20:2270957 - 2340901 on Build GRCh38 | Gain | TGM3 |
nsv585262 | Chr.20:2182010 - 2309687 on Build GRCh38 | Gain | TGM3 LOC388780 |
nsv828671 | Chr.20:2225538 - 2383922 on Build GRCh38 | Gain | TGM3 TGM6 LOC388780 |
nsv817881 | Chr.20:2229884 - 2362027 on Build GRCh38 | Gain | TGM3 LOC388780 |
nsv470535 | Chr.20:1948896 - 2780594 on Build GRCh38 | Gain | SNRPB MIR1292 NOP56 IDH3B EBF4 PDYN STK35 SNORA51 TGM3 TGM6 SNORD110 SNORD56 TMC2 SNORD86 LOC388780 ZNF343 LOC727993 SNORD119 SNORD57 |
nsv9781 | Chr.20:2224399 - 2385324 on Build GRCh38 | Gain+Loss | TGM3 TGM6 LOC388780 |
nsv585263 | Chr.20:2224165 - 2391136 on Build GRCh38 | Gain | TGM3 TGM6 LOC388780 |
esv3644998 | Chr.20:2148722 - 2690694 on Build GRCh38 | Gain | SNRPB MIR1292 NOP56 IDH3B SNORA51 TGM3 TGM6 SNORD110 SNORD56 TMC2 SNORD86 LOC388780 ZNF343 SNORD119 SNORD57 |
esv34630 | Chr.20:2244835 - 2383744 on Build GRCh38 | Gain | TGM3 TGM6 |
nsv585264 | Chr.20:2270973 - 2386563 on Build GRCh38 | Loss | TGM3 TGM6 |
esv2758778 | Chr.20:2149914 - 2494823 on Build GRCh38 | Gain | TGM3 TGM6 SNRPB LOC388780 ZNF343 SNORD119 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |