Assay Details
Target Gene Details
Entrez Gene ID: | 100506658 |
Gene Name: | occludin |
Gene Aliases: |
BLCPMG, PPP1R115 |
Location: |
Chr.5:69492292-69558104 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
OCLN | NM_001205254.1 | 3 | 812 | NP_001192183.1 |
NM_001205255.1 | NP_001192184.1 | |||
NM_002538.3 | 3 | 1042 | NP_002529.1 | |
XM_017008913.1 | 3 | 812 | XP_016864402.1 | |
XM_017008914.1 | 3 | 787 | XP_016864403.1 | |
AB451306.1 | 2 | 606 | ||
AB451437.1 | 2 | 606 | ||
AK290697.1 | 3 | 774 | ||
AK313501.1 | 3 | 785 | ||
BC029886.1 | 3 | 784 | AAH29886.1 | |
FJ786083.1 | ||||
FJ786084.1 | ||||
GQ225096.1 | ||||
GQ225097.1 | ||||
GQ225098.1 | ||||
GQ402517.1 | 2 | 650 | ||
U49184.1 | 3 | 773 | AAC50451.1 | |
U53823.1 | 3 | 1043 | AAB00195.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3570182 | Chr.5:69457781 - 69533508 on Build GRCh38 | Loss | LOC101928924 OCLN |
nsv1034024 | Chr.5:69464444 - 69822296 on Build GRCh38 | Gain | LOC728488 GTF2H2C GUSBP3 LOC101928924 OCLN |
dgv5695n100 | Chr.5:69508307 - 71365369 on Build GRCh38 | Gain | LOC728488 LOC107986352 GUSBP9 GUSBP3 LOC728526 SMA5 NAIP GTF2H2B LOC107986354 LOC647859 SERF1A LOC107986353 LOC441081 SMN2 SERF1B GTF2H2C SMN1 GTF2H2 SMA4 LOC102724392 LOC653080 LOC101929599 LOC107986351 OCLN |
nsv821643 | Chr.5:69272838 - 71076658 on Build GRCh38 | Loss | LOC728488 GUSBP3 LOC728526 SMA5 NAIP GTF2H2B LOC647859 CCDC125 SERF1A LOC101928924 SMN2 AK6 SMA4 LOC653080 CDK7 OCLN LOC107986354 LOC441081 MARVELD2 RAD17 SERF1B GTF2H2C SMN1 GTF2H2 LOC101929599 TAF9 LOC107986351 |
nsv1023116 | Chr.5:69448480 - 69571455 on Build GRCh38 | Gain | GTF2H2C LOC101928924 OCLN |
nsv428117 | Chr.5:69347454 - 71500057 on Build GRCh38 | Gain+Loss | LOC728488 LOC107986352 GUSBP3 LOC728526 SMA5 NAIP GTF2H2B LOC647859 SERF1A LOC101928924 SMN2 AK6 SMA4 LOC102724392 LOC653080 OCLN GUSBP9 BDP1 PMCHL2 LOC107986354 LOC107986353 LOC441081 MARVELD2 RAD17 SERF1B GTF2H2C SMN1 GTF2H2 LOC101929599 TAF9 LOC107986351 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |