Assay Details
Target Gene Details
Entrez Gene ID: | 5338 |
Gene Name: | phospholipase D2 |
Gene Aliases: |
- |
Location: |
Chr.17:4807101-4823432 on Build GRCh38 |
Assay Gene Location: | Within Exon 20 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PLD2 | NM_001243108.1 | 20 | 2198 | NP_001230037.1 |
NM_002663.4 | 20 | 2198 | NP_002654.3 | |
XM_005256696.2 | 11 | 1258 | XP_005256753.1 | |
XM_017024764.1 | 20 | 2198 | XP_016880253.1 | |
AB209374.1 | 15 | 3766 | BAD92611.1 | |
AF033850.1 | 20 | 2233 | AAD04197.1 | |
AF035483.1 | 19 | 2072 | AAC24498.1 | |
AF038440.1 | 20 | 2156 | AAB96655.1 | |
AF038441.1 | 20 | 2156 | AAB96656.1 | |
AK314797.1 | 20 | 2116 | ||
AY178289.1 | 11 | 1163 | AAO21120.1 | |
BC015033.1 | 20 | 2159 | AAH15033.1 | |
BC056871.1 | 20 | 2107 | AAH56871.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv833347 | Chr.17:4785297 - 4955981 on Build GRCh38 | Loss | PFN1 ENO3 RNF167 PSMB6 LOC107984973 GP1BA C17orf107 VMO1 PLD2 CHRNE MINK1 GLTPD2 SLC25A11 |
esv3639795 | Chr.17:4812578 - 4820832 on Build GRCh38 | Loss | PLD2 |
nsv574273 | Chr.17:4585589 - 5460332 on Build GRCh38 | Gain | RNF167 PSMB6 NUP88 LOC107984973 CXCL16 SCIMP DHX33 ZMYND15 PELP1 ARRB2 MIR6865 VMO1 TM4SF5 CHRNE INCA1 ZNF232 LOC102724009 PFN1 ENO3 LOC101928000 LOC100130950 ZNF594 CAMTA2 LOC400568 SMTNL2 GP1BA C17orf107 MIR6864 SPAG7 MED11 ZFP3 RPAIN ALOX15 SLC52A1 RABEP1 PLD2 LOC101927979 MINK1 GLTPD2 SLC25A11 KIF1C USP6 LOC101559451 C1QBP |
nsv833346 | Chr.17:4646256 - 4860871 on Build GRCh38 | Loss | PSMB6 LOC107984973 CXCL16 ZMYND15 MED11 PELP1 ARRB2 VMO1 TM4SF5 PLD2 MINK1 GLTPD2 LOC101559451 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |