Hs01700540_cn

• Gene Symbol: DDX55
• Assay Reference Genome Location: Chr.12:123620082 on build GRCh38
• Cytoband: 12q24.31

Target Gene Details

• Entrez Gene ID: 57696
• Gene Name: DEAD-box helicase 55
• Gene Aliases: -
• Location: Chr.12:123602077-123620943 on Build GRCh38
• Assay Gene Location: Within Exon 12

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
DDX55	NM_020936.2	14	1817	NP_065987.1
	NR_135104.1	14	1889
	NR_135105.1	14	1801
	XM_017019710.1	14	1856	XP_016875199.1
	XM_017019711.1	13	1911	XP_016875200.1
	XM_017019712.1	14	1709	XP_016875201.1
	XM_017019713.1	14	1832	XP_016875202.1
	XM_017019714.1	15	1990	XP_016875203.1
	XM_017019715.1	12	1557	XP_016875204.1
	XM_017019716.1	12	1502	XP_016875205.1
	XM_017019717.1	14	1754	XP_016875206.1
	XM_017019718.1	12	2172	XP_016875207.1
	XM_017019719.1	14	1709	XP_016875208.1
	XM_017019720.1	12	2787	XP_016875209.1
	AB046815.1	9	3644	BAB13421.1
	AK131442.1
	BC030020.2	14	1761	AAH30020.1
	BC035911.1	3	666	AAH35911.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv1566n100	Chr.12:123610211 - 123711309 on Build GRCh38	Gain	GTF2H3 DDX55 TCTN2 EIF2B1
dgv524e212	Chr.12:123614065 - 123625575 on Build GRCh38	Loss	DDX55 EIF2B1
nsv1042181	Chr.12:123552853 - 123668403 on Build GRCh38	Gain	LOC101927415 GTF2H3 DDX55 TMED2 EIF2B1

More Information

Additional Information:

For this assay, SNP(s) [rs78353231] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

RNA secondary structure unwinding

Function(s)

ATP-dependent RNA helicase activity
protein binding
ATP binding
poly(A) RNA binding