Assay Details
Target Gene Details
Entrez Gene ID: | 338707 |
Gene Name: | beta-1,4-N-acetyl-galactosaminyltransferase 4 |
Gene Aliases: |
- |
Location: |
Chr.11:369773-382117 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 9 - Intron 9 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B4GALNT4 | NM_178537.4 | NP_848632.2 | ||
XM_017017654.1 | XP_016873143.1 | |||
AB089939.1 | BAD06471.1 | |||
BC131528.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | ANO9 PTDSS2 B4GALNT4 IFITM2 CDHR5 LRRC56 PKP3 RASSF7 MIR210 LMNTD2 IRF7 MIR210HG IFITM5 IFITM3 LOC101059906 PGGHG LOC143666 SIGIRR IFITM1 PHRF1 HRAS RNH1 |
nsv552776 | Chr.11:366710 - 432436 on Build GRCh38 | Loss | ANO9 B4GALNT4 PKP3 SIGIRR |
esv28392 | Chr.11:363975 - 403432 on Build GRCh38 | Gain+Loss | B4GALNT4 PKP3 |
nsv951268 | Chr.11:368601 - 503700 on Build GRCh38 | Deletion | ANO9 PTDSS2 B4GALNT4 PKP3 SIGIRR RNH1 |
nsv552770 | Chr.11:356090 - 444628 on Build GRCh38 | Gain | ANO9 B4GALNT4 PKP3 SIGIRR |
dgv1505n54 | Chr.11:198510 - 470331 on Build GRCh38 | Gain | ODF3 ANO9 PTDSS2 B4GALNT4 BET1L IFITM2 PKP3 RIC8A IFITM5 IFITM3 PGGHG SIGIRR PSMD13 NLRP6 MIR6743 IFITM1 SIRT3 |
nsv1159790 | Chr.11:340219 - 491334 on Build GRCh38 | Deletion | ANO9 PTDSS2 B4GALNT4 PKP3 SIGIRR |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | SLC25A22 ANO9 PTDSS2 CHID1 LRRC56 PKP3 RASSF7 SNORA52 MIR210 AP2A2 CRACR2B TSPAN4 PNPLA2 PIDD1 LOC171391 LOC101059906 LOC143666 EPS8L2 CEND1 HRAS PANO1 B4GALNT4 POLR2L CDHR5 SCT LMNTD2 IRF7 DEAF1 PDDC1 MIR210HG CD151 TALDO1 SIGIRR DRD4 TMEM80 RPLP2 PHRF1 RNH1 |
dgv1507n54 | Chr.11:368778 - 382912 on Build GRCh38 | Loss | B4GALNT4 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |