Assay Details
Target Gene Details
Entrez Gene ID: | 10044 |
Gene Name: | SH2 domain containing 3C |
Gene Aliases: |
CHAT, NSP3, PRO34088, SHEP1 |
Location: |
Chr.9:127738317-127778769 on Build GRCh38 |
Assay Gene Location: | Within Exon 16 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SH2D3C | NM_001142531.1 | 9 | 1679 | NP_001136003.1 |
NM_001142532.1 | 9 | 1928 | NP_001136004.1 | |
NM_001142533.1 | 8 | 1816 | NP_001136005.1 | |
NM_001142534.1 | 8 | 1788 | NP_001136006.1 | |
NM_001252334.1 | 10 | 2185 | NP_001239263.1 | |
NM_005489.3 | 9 | 1814 | NP_005480.2 | |
NM_170600.2 | 10 | 2287 | NP_733745.1 | |
XM_005251639.1 | 9 | 1795 | XP_005251696.1 | |
XM_011518114.1 | 10 | 2271 | XP_011516416.1 | |
XM_011518115.1 | 10 | 2231 | XP_011516417.1 | |
XM_011518117.2 | 8 | 2907 | XP_011516419.1 | |
XM_017014174.1 | 8 | 2068 | XP_016869663.1 | |
AF124251.1 | 9 | 1726 | AAD28246.1 | |
AJ420431.1 | 3 | 356 | ||
AK056068.1 | 8 | 1816 | ||
AK096983.1 | 6 | 1109 | ||
AK128287.1 | 11 | 2218 | ||
AK291393.1 | 8 | 1780 | ||
AK292041.1 | 9 | 1742 | ||
AK292718.1 | 10 | 2158 | ||
AK294386.1 | 9 | 1679 | ||
AY358089.1 | 9 | 1796 | AAQ88456.1 | |
AY358440.1 | 9 | 1715 | AAQ89948.1 | |
BC027962.1 | 9 | 1685 | AAH27962.1 | |
BC032365.1 | 10 | 2162 | AAH32365.1 | |
BX647905.1 | 10 | 2111 | CAI46101.1 | |
CU454732.1 | 2 | 163 | ||
CU455802.1 | 2 | 163 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv12879n54 | Chr.9:127731234 - 127824409 on Build GRCh38 | Loss | LOC102723566 MIR3960 TOR2A TTC16 SH2D3C MIR2861 FPGS ENG CDK9 |
nsv615371 | Chr.9:127735841 - 127787855 on Build GRCh38 | Loss | MIR3960 SH2D3C MIR2861 CDK9 |
nsv471323 | Chr.9:127727464 - 127845239 on Build GRCh38 | Loss | LOC102723566 MIR3960 TOR2A TTC16 SH2D3C MIR2861 FPGS ENG CDK9 |
nsv466571 | Chr.9:127707924 - 127774438 on Build GRCh38 | Loss | TOR2A TTC16 SH2D3C PTRH1 CFAP157 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |