Assay Details
Target Gene Details
Entrez Gene ID: | 79048 |
Gene Name: | SECIS binding protein 2 |
Gene Aliases: |
SBP2 |
Location: |
Chr.9:89318473-89367117 on Build GRCh38 |
Assay Gene Location: | Within Exon 14 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SECISBP2 | NM_001282688.1 | 12 | 1795 | NP_001269617.1 |
NM_001282689.1 | 12 | 1677 | NP_001269618.1 | |
NM_001282690.1 | 12 | 1875 | NP_001269619.1 | |
NM_024077.4 | 12 | 1798 | NP_076982.3 | |
XM_005252196.2 | 12 | 1648 | XP_005252253.1 | |
XM_005252202.3 | 8 | 1030 | XP_005252259.1 | |
XM_006717282.2 | 12 | 1731 | XP_006717345.1 | |
XM_011519000.2 | 12 | 1852 | XP_011517302.1 | |
XM_011519001.1 | 11 | 1762 | XP_011517303.1 | |
XM_011519002.1 | 12 | 1738 | XP_011517304.1 | |
XM_011519003.1 | 12 | 1735 | XP_011517305.1 | |
XM_017015122.1 | 11 | 1675 | XP_016870611.1 | |
XM_017015123.1 | 12 | 1651 | XP_016870612.1 | |
XM_017015124.1 | 11 | 1558 | XP_016870613.1 | |
XM_017015125.1 | 10 | 1353 | XP_016870614.1 | |
AB208940.1 | 12 | 1718 | BAD92177.1 | |
AF380995.1 | 12 | 1751 | AAK57518.1 | |
AK023078.1 | 5 | 529 | BAB14393.1 | |
AK090608.1 | 12 | 1765 | ||
AK290182.1 | 12 | 1644 | ||
AK299161.1 | 12 | 1886 | ||
AK302852.1 | 12 | 1793 | ||
AL136881.1 | 12 | 1631 | CAB66815.1 | |
BC023142.1 | 6 | 645 | AAH23142.2 | |
BC036109.1 | 12 | 1760 | AAH36109.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3621014 | Chr.9:88877891 - 89641453 on Build GRCh38 | Gain | SECISBP2 UNQ6494 C9orf47 SHC3 MIR3153 S1PR3 CKS2 SEMA4D GADD45G |
nsv1041327 | Chr.9:89298100 - 89438209 on Build GRCh38 | Gain | SECISBP2 MIR3153 CKS2 SEMA4D |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |