Assay Details
Target Gene Details
Entrez Gene ID: | 4849 |
Gene Name: | CCR4-NOT transcription complex subunit 3 |
Gene Aliases: |
LENG2, NOT3, NOT3H |
Location: |
Chr.19:54137689-54155708 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 18 - Intron 18 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CNOT3 | NM_014516.3 | NP_055331.1 | ||
XM_005278279.1 | XP_005278336.1 | |||
XM_005278280.2 | XP_005278337.1 | |||
XM_005278281.1 | XP_005278338.1 | |||
XM_005278282.2 | XP_005278339.1 | |||
XM_011526992.1 | XP_011525294.1 | |||
AB014591.1 | ||||
AF180474.1 | AAF29828.1 | |||
AF211967.1 | 2 | 177 | ||
AI660119.1 | ||||
AK160386.1 | 16 | 2631 | BAD18729.1 | |
AK300434.1 | ||||
AL133647.1 | CAB63766.1 | |||
BC016474.1 | AAH16474.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3644782 | Chr.19:54138064 - 54154026 on Build GRCh38 | Gain | CNOT3 |
esv3644783 | Chr.19:54151022 - 54159664 on Build GRCh38 | Gain | LENG1 CNOT3 |
nsv515623 | Chr.19:54102901 - 54179150 on Build GRCh38 | Loss | LENG1 TMC4 MBOAT7 CNOT3 PRPF31 TFPT NDUFA3 |
nsv953613 | Chr.19:54097214 - 54198733 on Build GRCh38 | Deletion | LENG1 TMC4 MBOAT7 TSEN34 CNOT3 OSCAR PRPF31 TFPT NDUFA3 |
esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion | MIR518A2 LILRA5 CACNG8 VN1R4 MIR520A ZNF818P PRPF31 MIR518B LOC284379 CACNG7 MIR4752 FAM90A27P MIR517B DPRX LILRB3 MIR524 MIR1323 NLRP12 MIR515-1 OSCAR MIR521-2 MIR518D MIR526B MIR520E ZNF677 ZNF761 RPS9 MIR522 MIR373 PRKCG MIR520D CNOT3 MIR519D MIR515-2 LILRB5 NDUFA3 MIR517C MIR498 MIR519A1 MIR518A1 ZNF331 VN1R2 MIR520H MIR527 MIR520C TARM1 ZNF765 MBOAT7 MIR516A1 MIR519B MIR520G MIR526A2 MIR516B2 TPM3P9 MIR1283-2 MIR519A2 MIR371A LENG1 MIR520B MIR516B1 MIR1283-1 MIR518C MIR935 MIR517A MIR371B MIR518E VSTM1 TFPT MIR526A1 LOC105372457 CACNG6 MIR523 MIR519C ZNF813 ZNF525 MIR516A2 LILRA6 MIR525 MYADM ZNF845 MIR512-2 MIR372 TMC4 ZNF665 TSEN34 MIR521-1 BIRC8 LILRB2 MIR520F MIR512-1 MIR519E MIR518F |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |