Assay Details
Target Gene Details
Entrez Gene ID: | 100289580 |
Gene Name: | uncharacterized LOC100289580 |
Gene Aliases: |
- |
Location: |
Chr.16:88731180-88741425 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LOC100289580 | NR_103774.1 | 3 | 967 | |
AK127064.1 | 2 | 1719 | ||
AK294743.1 | 3 | 967 |
Target Gene Details
Entrez Gene ID: | 9780 |
Gene Name: | piezo type mechanosensitive ion channel component 1 |
Gene Aliases: |
DHS, FAM38A, LMPH3, Mib |
Location: |
Chr.16:88715338-88785220 on Build GRCh38 |
Assay Gene Location: | Within Exon 6 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PIEZO1 | NM_001142864.3 | 6 | 842 | NP_001136336.2 |
DR731297.1 | ||||
DV080349.1 | ||||
DV080374.1 | 3 | 342 | ||
KC602455.1 | 6 | 586 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1063024 | Chr.16:88707330 - 89238482 on Build GRCh38 | Gain |
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nsv471114 | Chr.16:88688461 - 88756339 on Build GRCh38 | Gain |
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nsv471113 | Chr.16:88650665 - 88764428 on Build GRCh38 | Loss |
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dgv3064n100 | Chr.16:88683753 - 88846491 on Build GRCh38 | Gain |
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nsv517643 | Chr.16:88713767 - 88756339 on Build GRCh38 | Loss |
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nsv833327 | Chr.16:88667431 - 88757621 on Build GRCh38 | Loss |
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nsv952070 | Chr.16:88257295 - 88780192 on Build GRCh38 | Deletion |
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nsv1927 | Chr.16:88712585 - 88743583 on Build GRCh38 | Insertion |
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nsv1160442 | Chr.16:88708161 - 88778524 on Build GRCh38 | Deletion |
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nsv482951 | Chr.16:88633593 - 90228345 on Build GRCh38 | Loss |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
dgv3065n100 | Chr.16:88711587 - 88927172 on Build GRCh38 | Gain |
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Additional Information:
For this assay, SNP(s) [rs115481622] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
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Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)