Assay Details
Target Gene Details
Entrez Gene ID: | 57099 |
Gene Name: | apoptosis and caspase activation inhibitor |
Gene Aliases: |
PDCD12 |
Location: |
Chr.15:33858602-34074877 on Build GRCh38 |
Assay Gene Location: | Within Exon 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AVEN | NM_020371.2 | 6 | 1466 | NP_065104.1 |
XM_011521818.2 | 7 | 1649 | XP_011520120.1 | |
XM_011521819.2 | 6 | 1692 | XP_011520121.1 | |
XM_011521820.1 | 6 | 1167 | XP_011520122.1 | |
AF283508.1 | 6 | 1462 | AAF91470.1 | |
AK025888.1 | 1 | 429 | ||
BC010488.1 | 6 | 1460 | AAH10488.1 | |
BC063533.1 | 6 | 1450 | AAH63533.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv471235 | Chr.15:33743328 - 34129750 on Build GRCh38 | Gain | CHRM5 EMC7 PGBD4 AVEN RYR3 |
nsv1052620 | Chr.15:32612402 - 34538731 on Build GRCh38 | Gain | EMC4 SCG5 GOLGA8A MIR1233-1 KATNBL1 NOP10 SLC12A6 MIR1233-2 LOC105370757 RYR3 LOC101928042 LOC100131315 LPCAT4 GREM1 CHRM5 GOLGA8B EMC7 LOC101928134 TMCO5B FMN1 ARHGAP11A PGBD4 AVEN NUTM1 |
esv33337 | Chr.15:31689863 - 34575097 on Build GRCh38 | Gain+Loss | GOLGA8O LOC100996255 MIR1233-1 NOP10 SLC12A6 LOC105370757 CHRNA7 RYR3 WHAMMP1 LPCAT4 CHRM5 LOC100653133 TMCO5B PGBD4 AVEN GOLGA8K EMC4 LOC105370940 SCG5 LOC101060588 GOLGA8N GOLGA8A KATNBL1 MIR1233-2 LOC101928042 LOC100131315 GREM1 ULK4P1 GOLGA8B EMC7 LOC101928134 FMN1 ARHGAP11A NUTM1 |
nsv568921 | Chr.15:33754434 - 33955421 on Build GRCh38 | Gain | AVEN RYR3 |
esv3569431 | Chr.15:33564570 - 35080307 on Build GRCh38 | Gain | EMC4 GOLGA8A MIR1233-1 KATNBL1 NOP10 ZNF770 SLC12A6 MIR1233-2 LOC101928174 RYR3 GJD2 LPCAT4 CHRM5 GOLGA8B EMC7 PGBD4 AVEN NUTM1 AQR ACTC1 |
nsv1044844 | Chr.15:33773323 - 34004628 on Build GRCh38 | Loss | CHRM5 AVEN RYR3 |
nsv568920 | Chr.15:33742220 - 34134417 on Build GRCh38 | Gain | CHRM5 EMC7 PGBD4 AVEN RYR3 |
dgv4456n54 | Chr.15:32604149 - 34557061 on Build GRCh38 | Gain | MIR1233-1 NOP10 SLC12A6 LOC105370757 RYR3 LPCAT4 CHRM5 TMCO5B PGBD4 AVEN EMC4 SCG5 GOLGA8N GOLGA8A KATNBL1 MIR1233-2 LOC101928042 LOC100131315 GREM1 GOLGA8B EMC7 LOC101928134 FMN1 ARHGAP11A NUTM1 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |