Assay Details
Target Gene Details
Entrez Gene ID: | 30820 |
Gene Name: | potassium voltage-gated channel interacting protein 1 |
Gene Aliases: |
KCHIP1, VABP |
Location: |
Chr.5:170353055-170736632 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
KCNIP1 | NM_001034838.2 | NP_001030010.1 | ||
XM_017009407.1 | XP_016864896.1 | |||
XM_017009408.1 | XP_016864897.1 | |||
AK301775.1 | ||||
DC420716.1 | ||||
DQ148476.1 | AAZ77793.1 |
Target Gene Details
Entrez Gene ID: | 3779 |
Gene Name: | potassium calcium-activated channel subfamily M regulatory beta subunit 1 |
Gene Aliases: |
BKbeta1, K(VCA)beta, SLO-BETA, hbeta1, hslo-beta, k(VCA)beta-1, slo-beta-1 |
Location: |
Chr.5:170378161-170389677 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
KCNMB1 | NM_004137.3 | 4 | 851 | NP_004128.1 |
AF026002.1 | 3 | 408 | AAB88805.1 | |
AK313979.1 | 4 | 829 | ||
AY044441.1 | 4 | 474 | AAK95827.1 | |
AY515264.1 | 4 | 512 | AAS20193.1 | |
U25138.1 | 4 | 567 | AAB02394.1 | |
U38907.1 | 3 | 408 | AAA81327.1 | |
U42600.1 | 4 | 461 | AAB16827.1 | |
U61536.1 | 4 | 513 | AAB61396.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv471054 | Chr.5:170278287 - 170532433 on Build GRCh38 | Loss |
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nsv600260 | Chr.5:170265550 - 170532433 on Build GRCh38 | Loss |
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Additional Information:
For this assay, SNP(s) [rs76348543] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
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Panther Classification:
Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)