Assay Details
Target Gene Details
Entrez Gene ID: | 58191 |
Gene Name: | C-X-C motif chemokine ligand 16 |
Gene Aliases: |
CXCLG16, SR-PSOX, SRPSOX |
Location: |
Chr.17:4733529-4739928 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CXCL16 | NM_001100812.1 | 1 | 298 | NP_001094282.1 |
NM_022059.3 | 1 | 298 | NP_071342.2 | |
AF301016.1 | 1 | 189 | AAG34365.1 | |
AK027389.1 | 1 | 216 | BAB55078.1 | |
AK292114.1 | 1 | 140 | ||
AK315017.1 | 1 | 298 | ||
AY358909.1 | 1 | 143 | AAQ89268.1 | |
BC017588.1 | 1 | 292 | AAH17588.1 | |
BC044930.1 | AAH44930.1 | |||
DC373874.1 | 1 | 298 | ||
JC209418.1 | 1 | 298 | ||
JC209420.1 | 1 | 298 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv574273 | Chr.17:4585589 - 5460332 on Build GRCh38 | Gain | CAMTA2 ZMYND15 ZNF232 USP6 LOC101559451 PELP1 LOC100130950 RABEP1 NUP88 CHRNE CXCL16 LOC107984973 PSMB6 ALOX15 RPAIN C17orf107 PLD2 RNF167 PFN1 DHX33 VMO1 MINK1 MIR6864 KIF1C ZNF594 ENO3 MED11 GLTPD2 LOC101928000 ZFP3 TM4SF5 C1QBP LOC400568 SPAG7 SCIMP SLC52A1 LOC101927979 INCA1 SMTNL2 SLC25A11 ARRB2 MIR6865 LOC102724009 GP1BA |
nsv833346 | Chr.17:4646256 - 4860871 on Build GRCh38 | Loss | ZMYND15 LOC101559451 PELP1 MED11 GLTPD2 CXCL16 TM4SF5 LOC107984973 PSMB6 PLD2 ARRB2 VMO1 MINK1 |
nsv1952 | Chr.17:4726245 - 4748889 on Build GRCh38 | Insertion | ZMYND15 MED11 CXCL16 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |