Assay Details
Target Gene Details
Entrez Gene ID: | 55911 |
Gene Name: | apolipoprotein B receptor |
Gene Aliases: |
APOB100R, APOB48R |
Location: |
Chr.16:28494649-28498970 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
APOBR | NM_018690.3 | 2 | 2705 | NP_061160.3 |
AF141332.1 | 3 | 2655 | AAF76255.1 | |
AF141334.1 | 3 | 2655 | AAF78765.1 | |
AK025123.1 | 1 | 557 | ||
AK075085.1 | 1 | 380 | ||
BC119786.1 | 3 | 2655 | ||
BC119788.1 | 3 | 2450 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv509608 | Chr.16:28449797 - 28632895 on Build GRCh38 | Insertion | NUPR1 SGF29 APOBR SULT1A2 SULT1A1 IL27 CLN3 |
esv2758640 | Chr.16:28163817 - 29139232 on Build GRCh38 | Gain+Loss | ATP2A1 ATP2A1-AS1 SPNS1 NPIP SH2B1 XPO6 SGF29 APOBR ATXN2L SULT1A1 LOC101928215 TUFM MIR4517 NPIPB8 CLN3 NUPR1 SULT1A2 MIR6862-2 RRN3P2 NFATC2IP SBK1 NPIPB6 MIR4721 EIF3C NPIPB9 CD19 RABEP2 IL27 EIF3CL LAT MIR6862-1 |
nsv1059555 | Chr.16:28373144 - 29195838 on Build GRCh38 | Gain | ATP2A1 ATP2A1-AS1 SPNS1 NPIP SH2B1 SGF29 APOBR ATXN2L SULT1A1 LOC101928215 TUFM MIR4517 NPIPB8 CLN3 NUPR1 SULT1A2 MIR6862-2 RRN3P2 NFATC2IP MIR4721 EIF3C LOC107984832 NPIPB9 CD19 RABEP2 IL27 EIF3CL LAT MIR6862-1 |
nsv833180 | Chr.16:28346157 - 28574165 on Build GRCh38 | Loss | NUPR1 SGF29 APOBR IL27 EIF3CL CLN3 MIR6862-1 NPIPB6 |
nsv9415 | Chr.16:28468881 - 28498959 on Build GRCh38 | Gain | APOBR CLN3 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |