Assay Details
Target Gene Details
Entrez Gene ID: | 92745 |
Gene Name: | solute carrier family 38 member 5 |
Gene Aliases: |
JM24, SN2, SNAT5, pp7194 |
Location: |
Chr.X:48458537-48470256 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 13 - Exon 14 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC38A5 | NM_033518.3 | NP_277053.2 | ||
XM_005272694.3 | XP_005272751.2 | |||
XM_005272695.4 | XP_005272752.3 | |||
XM_005272697.2 | XP_005272754.2 | |||
XM_005272698.4 | XP_005272755.2 | |||
XM_006724569.3 | XP_006724632.1 | |||
XM_017029960.1 | XP_016885449.1 | |||
XM_017029961.1 | XP_016885450.1 | |||
AF276889.1 | AAK61856.1 | |||
AF318358.1 | AAL55865.1 | |||
AK094788.1 | ||||
BC019246.2 | AAH19246.1 | |||
BC027721.2 | AAH27721.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv528292 | Chr.X:48433286 - 49274368 on Build GRCh38 | Gain | LOC101927635 CACNA1F PPP1R3F ERAS TFE3 SYP PCSK1N PIM2 GLOD5 PRAF2 SLC35A2 WAS CCDC22 RBM3 GPKOW PLP2 PRICKLE3 MAGIX WDR13 HDAC6 GATA1 TBC1D25 SLC38A5 GRIPAP1 KCND1 WDR45 FOXP3 TIMM17B SUV39H1 FTSJ1 PORCN EBP PQBP1 SYP-AS1 OTUD5 CCDC120 |
esv32909 | Chr.X:48003374 - 49285646 on Build GRCh38 | Gain+Loss | LOC101927635 CACNA1F PPP1R3F ERAS TFE3 SSX6 SSX3 SYP PCSK1N PIM2 GLOD5 SPACA5B PRAF2 SSX4 ZNF182 SLC35A2 SSX5 WAS CCDC22 RBM3 GPKOW PLP2 PRICKLE3 MAGIX WDR13 HDAC6 GATA1 TBC1D25 SLC38A5 GRIPAP1 KCND1 WDR45 SSX1 ZNF630-AS1 FOXP3 SPACA5 TIMM17B ZNF630 SUV39H1 FTSJ1 PORCN EBP PQBP1 SYP-AS1 SSX4B OTUD5 SSX9 CCDC120 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |