Hs01538855_cn

• Gene Symbol: LOXL1
• Assay Reference Genome Location: Chr.15:73926655 on build GRCh38
• Cytoband: 15q24.1

Target Gene Details

• Entrez Gene ID: 4016
• Gene Name: lysyl oxidase like 1
• Gene Aliases: LOL, LOXL
• Location: Chr.15:73926451-73952141 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOXL1	NM_005576.3	1	198	NP_005567.2
	XM_011521555.1	1	205	XP_011519857.1
	AK303982.1	1	194
	AK314222.1	1	196
	AL529650.3	1	224
	BC015090.2	1	177	AAH15090.1
	BC068542.1	1	198	AAH68542.1
	L21186.1	1	177	AAA50162.1

Target Gene Details

• Entrez Gene ID: 100287616
• Gene Name: LOXL1 antisense RNA 1
• Gene Aliases: -
• Location: Chr.15:73917468-73928248 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOXL1-AS1	NR_040066.1
	NR_040067.1
	NR_040068.1
	NR_040069.1
	NR_040070.1
	AK056376.1
	AK056885.1
	BX355383.2
	BX366015.2
	DA021396.1
	DA038997.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1604	Chr.15:73903279 - 73936860 on Build GRCh38	Insertion	LOXL1 TBC1D21 LOXL1-AS1
nsv1603	Chr.15:73898881 - 73943392 on Build GRCh38	Deletion	LOXL1 TBC1D21 LOXL1-AS1
esv2760040	Chr.15:73922773 - 74172575 on Build GRCh38	Gain+Loss	LOXL1 LOC732265 STOML1 LOC283731 GOLGA6A PML LOXL1-AS1 ISLR2
nsv1121512	Chr.15:72670085 - 75273877 on Build GRCh38	Deletion	CPLX3 HCN4 ADPGK-AS1 CCDC33 MIR4513 LOC732265 MIR6882 STRA6 HIGD2B REC114 SCAMP5 EDC3 LOC101929333 C15orf59 CD276 LOC105376731 C15orf59-AS1 GOLGA6C LOC283731 FAM219B CLK3 CYP11A1 LOXL1-AS1 ARID3B ISLR SCAMP2 TBC1D21 LOC729739 BBS4 ISLR2 UBL7-AS1 ULK3 NPTN LOXL1 LOC102723750 LMAN1L COX5A ADPGK GOLGA6A CSK PPCDC RPP25 MIR6881 MPI C15orf39 SEMA7A PML CYP1A1 LOC107984728 STOML1 CYP1A2 NPTN-IT1 UBL7 NEO1

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

oxidase

Gene Ontology Categories:

Process(es)

protein deamination
extracellular matrix organization
response to lipopolysaccharide
aorta development
oxidation-reduction process

Function(s)

copper ion binding
oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor