Assay Details
Target Gene Details
Entrez Gene ID: | 2583 |
Gene Name: | beta-1,4-N-acetyl-galactosaminyltransferase 1 |
Gene Aliases: |
GALGT, GALNACT, GalNAc-T, SPG26 |
Location: |
Chr.12:57623409-57633239 on Build GRCh38 |
Assay Gene Location: | Within Exon 13 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B4GALNT1 | XM_005268773.4 | 11 | 3671 | XP_005268830.1 |
XM_011538147.2 | 12 | 3689 | XP_011536449.1 | |
XM_011538148.2 | 12 | 3656 | XP_011536450.1 | |
XM_017019140.1 | 11 | 3773 | XP_016874629.1 | |
XM_017019141.1 | 11 | 3485 | XP_016874630.1 | |
XM_017019142.1 | 11 | 3350 | XP_016874631.1 | |
AB209460.1 | 10 | 3853 | BAD92697.1 |
Target Gene Details
Entrez Gene ID: | 65012 |
Gene Name: | solute carrier family 26 member 10 |
Gene Aliases: |
- |
Location: |
Chr.12:57619910-57626151 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 10 - Intron 11 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC26A10 | NM_133489.2 | NP_597996.2 | ||
AF331523.1 | AAM92901.1 | |||
AK122981.1 | BAC85515.1 | |||
AK314085.1 | ||||
AL050358.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv482992 | Chr.12:56206217 - 57706217 on Build GRCh38 | Gain+Loss | LOC101927583 MYO1A ZBTB39 NABP2 OS9 DDIT3 DTX3 PRIM1 ATP5B STAC3 GPR182 LRP1 MARS STAT2 B4GALNT1 SLC26A10 IL23A KIF5A COQ10A NXPH4 SNORA105C PAN2 MIR616 GLS2 DCTN2 GLI1 NEMP1 NDUFA4L2 ANKRD52 RNF41 HBCBP SLC39A5 RDH16 INHBC TAC3 APOF ARHGEF25 CS RBMS2 SHMT2 MIP MIR6758 BAZ2A SNORD59A INHBE MIR1228 CNPY2 PTGES3 NACA MBD6 ARHGAP9 PIP4K2C LRP1-AS SNORD59B NAB2 R3HDM2 STAT6 SPRYD4 TIMELESS SDR9C7 HSD17B6 |
More Information
Additional Information:
For this assay, SNP(s) [rs73347918] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |