Assay Details
Target Gene Details
Entrez Gene ID: | 22980 |
Gene Name: | transcription factor 25 |
Gene Aliases: |
FKSG26, Hulp1, NULP1, PRO2620, hKIAA1049 |
Location: |
Chr.16:89873583-89911384 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TCF25 | NM_014972.2 | 1 | 75 | NP_055787.1 |
XM_005256297.2 | 1 | 69 | XP_005256354.1 | |
XM_005256298.2 | 1 | 69 | XP_005256355.1 | |
XM_005256299.2 | 1 | 69 | XP_005256356.1 | |
XM_011522956.2 | 1 | 69 | XP_011521258.1 | |
XM_011522957.2 | 1 | 69 | XP_011521259.1 | |
XM_011522958.2 | 1 | 69 | XP_011521260.1 | |
XM_011522959.2 | 1 | 69 | XP_011521261.1 | |
XM_011522960.2 | 1 | 69 | XP_011521262.1 | |
XM_011522961.2 | 1 | 71 | XP_011521263.1 | |
XM_017023047.1 | 1 | 69 | XP_016878536.1 | |
XM_017023048.1 | 1 | 69 | XP_016878537.1 | |
XM_017023049.1 | 1 | 69 | XP_016878538.1 | |
XM_017023050.1 | 1 | 69 | XP_016878539.1 | |
XM_017023051.1 | 1 | 69 | XP_016878540.1 | |
XM_017023052.1 | 1 | 69 | XP_016878541.1 | |
XM_017023054.1 | 1 | 71 | XP_016878543.1 | |
XM_017023055.1 | 1 | 71 | XP_016878544.1 | |
XM_017023056.1 | 1 | 78 | XP_016878545.1 | |
AF322111.1 | AAG50276.1 | |||
AK024679.1 | BAB14959.1 | |||
AK301053.1 | 1 | 69 | ||
BC000959.1 | AAH00959.1 | |||
BC009349.2 | AAH09349.1 | |||
BC011884.2 | 1 | 49 | AAH11884.1 | |
BI913551.1 | 1 | 75 | ||
DQ321703.1 | ABC55265.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv573744 | Chr.16:89738447 - 89915950 on Build GRCh38 | Loss | LOC105371419 TCF25 ZNF276 FANCA LOC107984817 SPIRE2 |
esv2758671 | Chr.16:89804324 - 89901541 on Build GRCh38 | Loss | LOC105371419 TCF25 FANCA LOC107984817 SPIRE2 |
esv2762221 | Chr.16:89610380 - 90039318 on Build GRCh38 | Gain+Loss | SPATA33 AFG3L1P CENPBD1 DEF8 DPEP1 LOC107984817 VPS9D1 TUBB3 DBNDD1 MC1R GAS8 VPS9D1-AS1 GAS8-AS1 LOC105371419 SPATA2L TCF25 ZNF276 CDK10 FANCA SPIRE2 CHMP1A |
nsv573810 | Chr.16:89857498 - 90037251 on Build GRCh38 | Loss | DBNDD1 MC1R GAS8 AFG3L1P CENPBD1 GAS8-AS1 DEF8 TCF25 SPIRE2 TUBB3 |
nsv428331 | Chr.16:89216635 - 90185980 on Build GRCh38 | Gain+Loss | PRDM7 SPATA33 CENPBD1 FAM157C TUBB8P7 SPG7 LOC105371414 DBNDD1 GAS8 SPATA2L TCF25 ZNF778 ANKRD11 ZNF276 CDK10 AFG3L1P SNORD68 LOC100287036 DEF8 DPEP1 URAHP LOC107984817 VPS9D1 TUBB3 MC1R VPS9D1-AS1 GAS8-AS1 LOC101927817 CPNE7 LOC105371419 RPL13 FANCA SPIRE2 CHMP1A |
nsv573799 | Chr.16:89852186 - 90022379 on Build GRCh38 | Gain | DBNDD1 MC1R GAS8 AFG3L1P CENPBD1 DEF8 LOC105371419 TCF25 SPIRE2 TUBB3 |
nsv482951 | Chr.16:88633593 - 90228345 on Build GRCh38 | Loss | LOC107987238 PRDM7 SPATA33 FAM157C SNAI3-AS1 GAS8 SLC22A31 ZNF778 ZNF276 LOC101927793 CYBA AFG3L1P GALNS SNORD68 LOC100287036 DEF8 RNF166 LOC400558 LOC107984817 PABPN1L IL17C MVD VPS9D1-AS1 GAS8-AS1 LOC101927817 CPNE7 FANCA SPIRE2 CHMP1A CENPBD1 ACSF3 LOC100129697 TUBB8P7 SPG7 CDT1 LOC105371414 LOC100289580 DBNDD1 SNAI3 LINC00304 TRAPPC2L SPATA2L TCF25 ANKRD11 CDK10 APRT CDH15 MIR4722 CBFA2T3 DPEP1 URAHP PIEZO1 VPS9D1 TUBB3 MC1R LOC339059 LOC105371419 LOC105371409 CTU2 RPL13 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |