Assay Details
Target Gene Details
Entrez Gene ID: | 79680 |
Gene Name: | chromosome 22 open reading frame 29 |
Gene Aliases: |
BOP |
Location: |
Chr.22:19846138-19854848 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
C22orf29 | NM_024627.5 | 3 | 2758 | NP_078903.3 |
AL832509.1 | 3 | 2647 | ||
BX640785.1 | 2 | 2847 | CAE45875.1 | |
BX640969.1 | 3 | 2727 | CAE45984.1 | |
BX640998.1 | 3 | 2727 | CAE46001.1 |
Target Gene Details
Entrez Gene ID: | 54584 |
Gene Name: | G protein subunit beta 1 like |
Gene Aliases: |
DGCRK3, FKSG1, GY2, WDR14, WDVCF |
Location: |
Chr.22:19788411-19854939 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GNB1L | NM_053004.2 | NP_443730.1 | ||
AB051432.1 | ||||
AF238328.1 | AAG36826.1 | |||
AF301895.1 | AAG53933.1 | |||
AY007378.1 | AAG12162.1 | |||
BC012060.1 | AAH12060.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv834129 | Chr.22:19705617 - 19919068 on Build GRCh38 | Loss | C22orf29 GP1BB TBX1 SEPT5-GP1BB SEPT5 TXNRD2 GNB1L |
nsv953024 | Chr.22:19842078 - 19854877 on Build GRCh38 | Deletion | C22orf29 GNB1L |
esv3893434 | Chr.22:19470889 - 20343372 on Build GRCh38 | Gain | ZDHHC8 SEPT5 TXNRD2 ARVCF MIR1286 LINC00895 UFD1L MIR6816 TANGO2 LINC00896 CDC45 LOC101927859 DGCR6L C22orf29 MIR4761 RANBP1 GNB1L CLDN5 CCDC188 LOC284865 TRMT2A MIR1306 DGCR8 MIR3618 MIR185 GP1BB TBX1 SEPT5-GP1BB LOC440792 RTN4R COMT |
nsv828939 | Chr.22:19696032 - 20324465 on Build GRCh38 | Loss | ZDHHC8 SEPT5 TXNRD2 ARVCF MIR1286 MIR6816 TANGO2 LINC00896 DGCR6L C22orf29 MIR4761 RANBP1 GNB1L CCDC188 LOC284865 TRMT2A MIR1306 DGCR8 MIR3618 MIR185 GP1BB TBX1 SEPT5-GP1BB LOC440792 RTN4R COMT |
nsv828938 | Chr.22:19691069 - 20324465 on Build GRCh38 | Gain | ZDHHC8 SEPT5 TXNRD2 ARVCF MIR1286 MIR6816 TANGO2 LINC00896 DGCR6L C22orf29 MIR4761 RANBP1 GNB1L CCDC188 LOC284865 TRMT2A MIR1306 DGCR8 MIR3618 MIR185 GP1BB TBX1 SEPT5-GP1BB LOC440792 RTN4R COMT |
nsv834130 | Chr.22:19837923 - 19940567 on Build GRCh38 | Loss | C22orf29 TXNRD2 GNB1L |
esv3568260 | Chr.22:19777375 - 19881883 on Build GRCh38 | Loss | C22orf29 TBX1 TXNRD2 GNB1L |
esv3647279 | Chr.22:19719848 - 19878980 on Build GRCh38 | Gain | C22orf29 GP1BB TBX1 SEPT5-GP1BB SEPT5 TXNRD2 GNB1L |
dgv7983n54 | Chr.22:19762002 - 20321870 on Build GRCh38 | Gain | C22orf29 MIR4761 ZDHHC8 RANBP1 TXNRD2 GNB1L CCDC188 LOC284865 TRMT2A ARVCF MIR1306 MIR1286 DGCR8 MIR3618 MIR185 TBX1 MIR6816 TANGO2 LINC00896 LOC440792 RTN4R DGCR6L COMT |
esv3575418 | Chr.22:18161776 - 19963846 on Build GRCh38 | Gain | SEPT5 USP18 TXNRD2 HIRA TMEM191B DGCR2 DGCR5 CLTCL1 GSC2 DGCR6 LINC00895 DGCR11 LINC01311 DGCR14 UFD1L LOC729461 PRODH PI4KAP1 LOC642643 CDC45 FAM230A LOC100996415 C22orf29 MIR4761 GGT3P LOC102725072 SLC25A1 GNB1L CLDN5 LOC100996432 LOC100996401 DGCR10 C22orf39 GP1BB MRPL40 DGCR9 TBX1 SEPT5-GP1BB TSSK2 RIMBP3 COMT |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |