Assay Details
Target Gene Details
Entrez Gene ID: | 8678 |
Gene Name: | beclin 1 |
Gene Aliases: |
ATG6, VPS30, beclin1 |
Location: |
Chr.17:42810132-42824316 on Build GRCh38 |
Assay Gene Location: | Within Exon 13 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
BECN1 | NM_001313998.1 | 12 | 1834 | NP_001300927.1 |
NM_001313999.1 | 10 | 1529 | NP_001300928.1 | |
NM_001314000.1 | 9 | 1463 | NP_001300929.1 | |
NM_003766.4 | 12 | 1856 | NP_003757.1 | |
XM_005257759.2 | 10 | 1574 | XP_005257816.1 | |
XM_005257760.3 | 11 | 1635 | XP_005257817.1 | |
XM_011525421.2 | 12 | 1761 | XP_011523723.1 | |
XM_017025262.1 | 12 | 1834 | XP_016880751.1 | |
XM_017025263.1 | 10 | 1647 | XP_016880752.1 | |
XM_017025264.1 | 11 | 1708 | XP_016880753.1 | |
AA427906.1 | 1 | 322 | ||
AF139131.1 | 12 | 1790 | AAD27650.1 | |
AK298619.1 | 9 | 1435 | ||
AK299616.1 | ||||
BC010276.1 | 12 | 1803 | AAH10276.1 | |
BX647788.1 | 9 | 4559 | ||
L38932.1 | 7 | 1225 | AAB59573.1 |
Target Gene Details
Entrez Gene ID: | 124817 |
Gene Name: | cyclin N-terminal domain containing 1 |
Gene Aliases: |
CNTD |
Location: |
Chr.17:42798667-42811587 on Build GRCh38 |
Assay Gene Location: | Within Exon 8 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CNTD1 | NM_173478.2 | 7 | 2133 | NP_775749.2 |
XM_005257043.4 | 7 | 1896 | XP_005257100.1 | |
XM_005257044.4 | 7 | 1914 | XP_005257101.1 | |
XM_005257045.4 | 6 | 2056 | XP_005257102.1 | |
XM_006721690.2 | 7 | 2161 | XP_006721753.1 | |
XM_011524310.2 | 7 | 2080 | XP_011522612.1 | |
XM_011524311.2 | 6 | 1738 | XP_011522613.1 | |
XM_017024171.1 | 6 | 2084 | XP_016879660.1 | |
AK097456.1 | 7 | 2049 | BAC05060.1 | |
AL833052.1 | 5 | 1513 | CAH56287.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv833450 | Chr.17:42660985 - 42825144 on Build GRCh38 | Loss | PLEKHH3 CNTD1 VPS25 WNK4 MIR6781 BECN1 EZH1 CNTNAP1 CCR10 RAMP2-AS1 COA3 MIR6780A RAMP2 TUBG2 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |