Assay Details
Target Gene Details
Entrez Gene ID: | 201254 |
Gene Name: | stimulated by retinoic acid 13 |
Gene Aliases: |
CENP-X, CENPX, D9, FAAP10, MHF2 |
Location: |
Chr.17:82018703-82022930 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 2 - Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
STRA13 | NM_001271006.1 | NP_001257935.1 | ||
NM_001271007.1 | NP_001257936.1 | |||
NM_144998.3 | NP_659435.2 | |||
XM_005256339.2 | XP_005256396.1 | |||
XM_017024326.1 | XP_016879815.1 | |||
XM_017024327.1 | XP_016879816.1 | |||
XM_017024328.1 | XP_016879817.1 | |||
XM_017024329.1 | XP_016879818.1 | |||
BC009571.1 | AAH09571.1 | |||
BC011610.1 | AAH11610.1 | |||
BI837753.1 | ||||
CB110145.1 | ||||
HY110543.1 | ||||
U95006.1 | AAB53638.1 | |||
U95007.1 | AAB53639.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv952392 | Chr.17:81885825 - 82065724 on Build GRCh38 | Deletion | MAFG MAFG-AS1 LRRC45 ANAPC11 STRA13 RFNG PYCR1 DCXR NPB ALYREF MYADML2 SIRT7 DUS1L PCYT2 RAC3 GPS1 ASPSCR1 NOTUM |
nsv576183 | Chr.17:81991355 - 82086850 on Build GRCh38 | Loss | DUS1L RAC3 LRRC45 GPS1 ASPSCR1 FASN STRA13 RFNG DCXR |
nsv428351 | Chr.17:81152631 - 83064073 on Build GRCh38 | Gain | ACTG1 MAFG ZNF750 OGFOD3 CCDC57 CEP131 MAFG-AS1 LRRC45 OXLD1 TBCD MCRIP1 RFNG UTS2R DCXR SECTM1 NPLOC4 B3GNTL1 AATK GPS1 C17orf89 LOC100130370 CCDC137 SLC38A10 TEPSIN LOC105376790 BAHCC1 MRPL12 MIR4740 FASN STRA13 PYCR1 MIR6787 SLC25A10 CD7 HEXDC FN3KRP ASPSCR1 FOXK2 ARHGDIA MIR3186 NARF TSPAN10 FN3K P4HB LOC105371944 LOC105371925 LOC101929511 MIR4525 ANAPC11 PDE6G WDR45B CSNK1D SIRT7 PCYT2 FSCN2 C17orf62 LOC101929552 LINC00482 TMEM105 RAB40B LOC105376791 NOTUM GCGR FAAP100 SNORD134 MIR6786 AATK-AS1 NPB ALYREF ARL16 MYADML2 HGS DUS1L RAC3 SLC16A3 TEX19 PPP1R27 |
nsv470620 | Chr.17:81516973 - 82064485 on Build GRCh38 | Loss | MAFG MAFG-AS1 LRRC45 OXLD1 ANAPC11 PDE6G MCRIP1 RFNG DCXR NPLOC4 SIRT7 PCYT2 FSCN2 GPS1 CCDC137 NOTUM GCGR MRPL12 FAAP100 STRA13 PYCR1 MIR6786 NPB ALYREF SLC25A10 ARL16 MYADML2 HGS DUS1L RAC3 ASPSCR1 ARHGDIA TSPAN10 P4HB PPP1R27 |
dgv5800n54 | Chr.17:82013189 - 82035336 on Build GRCh38 | Loss | RAC3 LRRC45 ASPSCR1 STRA13 |
esv21913 | Chr.17:81828123 - 83103548 on Build GRCh38 | Gain+Loss | MAFG ZNF750 OGFOD3 CCDC57 MAFG-AS1 LRRC45 TBCD MCRIP1 RFNG UTS2R DCXR SECTM1 B3GNTL1 GPS1 LOC105376790 FASN STRA13 PYCR1 MIR6787 CD7 HEXDC FN3KRP ASPSCR1 FOXK2 ARHGDIA NARF FN3K P4HB LOC105371944 METRNL LOC101929511 MIR4525 ANAPC11 WDR45B CSNK1D SIRT7 PCYT2 C17orf62 LOC101929552 RAB40B LOC105376791 NOTUM SNORD134 NPB ALYREF MYADML2 DUS1L RAC3 SLC16A3 TEX19 PPP1R27 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |