Assay Details
Target Gene Details
Entrez Gene ID: | 64223 |
Gene Name: | MTOR associated protein, LST8 homolog |
Gene Aliases: |
GBL, GbetaL, LST8, POP3, WAT1 |
Location: |
Chr.16:2205177-2209417 on Build GRCh38 |
Assay Gene Location: | Within Exon 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MLST8 | NM_001199173.1 | NP_001186102.1 | ||
NM_001199174.1 | NP_001186103.1 | |||
NM_001199175.1 | NP_001186104.1 | |||
NM_022372.4 | NP_071767.3 | |||
XM_005255475.3 | 4 | 372 | XP_005255532.2 | |
XM_005255478.2 | 4 | 577 | XP_005255535.1 | |
XM_005255479.2 | 4 | 504 | XP_005255536.1 | |
XM_017023548.1 | XP_016879037.1 | |||
XM_017023549.1 | XP_016879038.1 | |||
XM_017023550.1 | XP_016879039.1 | |||
XM_017023551.1 | XP_016879040.1 | |||
XM_017023552.1 | 4 | 587 | XP_016879041.1 | |
AK021536.1 | ||||
AK022227.1 | BAB13990.1 | |||
AK098762.1 | ||||
AK302201.1 | 3 | 405 | ||
AK304390.1 | ||||
AU117583.1 | ||||
AU121635.1 | ||||
AY223837.1 | 3 | 406 | AAO73410.1 | |
BC001313.2 | AAH01313.1 | |||
BC017119.1 | AAH17119.1 | |||
BC052292.1 | AAH52292.1 | |||
BC088354.1 | AAH88354.1 | |||
BI761765.1 | ||||
DA382215.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | WFIKKN1 NTHL1 MIR5587 TELO2 SNHG19 PRSS29P WDR24 SLC9A3R2 SOX8 NTN3 TPSB2 NARFL RAB26 DECR2 CCDC154 TMEM8A NHLRC4 BAIAP3 RPUSD1 PDPK1 FAM234A LMF1 STUB1 DDX11L10 HN1L CHTF18 CAPN15 ARHGDIG SNORD60 PRR35 PKD1 CACNA1H MIR940 UBE2I CCNF MIR662 PRR25 NME4 PGP ZNF598 MCRIP2 MIR3178 SNRNP25 CCDC78 AXIN1 LMF1-AS1 C1QTNF8 MEIOB GNG13 MAPK8IP3 CLCN7 RAB40C LOC105371184 SYNGR3 MIR4516 FBXL16 FAHD1 METRN HAGHL TPSG1 UNKL ABCA3 MIR3180-5 ECI1 SNORA10 NPW FAM173A POLR3K MPG HBZ LOC105371049 EME2 CRAMP1 TSC2 NUBP2 HBQ1 AMDHD2 PTX4 PRSS27 TBL3 LOC107987233 TSR3 RGS11 MIR6768 HBM CEMP1 RPL23AP5 RPL3L PIGQ MIR3177 LOC105371046 SNHG9 HS3ST6 ATP6V0C GFER HBA2 E4F1 C16orf59 SSTR5 MIR6767 RHOT2 LOC105371038 HBA1 LOC101929280 TMEM204 RAB11FIP3 KCTD5 NOXO1 LOC100134368 TPSAB1 METTL26 IFT140 LINC00254 RNF151 MLST8 RHBDF1 ERVK13-1 TRAF7 LOC107984876 LOC105371045 LINC00235 MIR3677 RNPS1 FLJ42627 MRPL28 SSTR5-AS1 MIR3176 BRICD5 HAGH JMJD8 CASKIN1 C16orf91 MIR6859-4 MIR4717 ABCA17P NME3 WASIR2 SNORA78 SPSB3 RHBDL1 LOC729652 WDR90 GNPTG TPSD1 LOC652276 MRPS34 SNORA64 NPRL3 PDIA2 LOC105371047 NDUFB10 TBC1D24 LUC7L MSRB1 MIR6511B1 MSLN LOC100287175 DNASE1L2 MIR1225 IGFALS RPS2 LOC106660606 |
nsv471072 | Chr.16:1971892 - 2317508 on Build GRCh38 | Loss | BRICD5 NTHL1 CASKIN1 SNHG19 SYNGR3 MIR4516 GFER MIR4717 E4F1 SLC9A3R2 RAB26 ABCA3 MIR3180-5 ECI1 NPW NOXO1 SNORD60 PKD1 LOC105371049 MLST8 MIR6511B1 MIR940 TRAF7 DNASE1L2 TSC2 MIR1225 MIR3677 RNPS1 PGP ZNF598 LOC106660606 TBL3 |
dgv4861n54 | Chr.16:2083900 - 2246850 on Build GRCh38 | Loss | MIR3180-5 ECI1 BRICD5 SNORD60 CASKIN1 PKD1 LOC105371049 SNHG19 MLST8 MIR6511B1 MIR4516 TRAF7 DNASE1L2 TSC2 E4F1 MIR1225 RAB26 PGP |
dgv4863n54 | Chr.16:2141733 - 2274302 on Build GRCh38 | Loss | ECI1 BRICD5 SNORD60 CASKIN1 SNHG19 MLST8 MIR940 TRAF7 DNASE1L2 E4F1 MIR3677 RNPS1 RAB26 PGP LOC106660606 |
nsv1711 | Chr.16:2199093 - 2232650 on Build GRCh38 | Insertion | BRICD5 E4F1 PGP MLST8 |
nsv457351 | Chr.16:2156590 - 2274302 on Build GRCh38 | Loss | MIR940 TRAF7 DNASE1L2 ECI1 BRICD5 E4F1 MIR3677 RNPS1 CASKIN1 PGP LOC106660606 MLST8 |
nsv1052260 | Chr.16:2074546 - 2629655 on Build GRCh38 | Gain | MIR3178 BRICD5 MIR6768 CEMP1 CASKIN1 SNHG19 MIR4516 ATP6V0C MIR4717 ABCA17P E4F1 C16orf59 MIR6767 NTN3 RAB26 LOC729652 ABCA3 LOC652276 MIR3180-5 ECI1 PDPK1 SNORD60 TBC1D24 PKD1 LOC105371049 MLST8 MIR6511B1 MIR940 TRAF7 DNASE1L2 CCNF TSC2 MIR1225 MIR3677 RNPS1 PGP AMDHD2 LOC106660606 |
nsv952902 | Chr.16:2143400 - 2339999 on Build GRCh38 | Deletion | ECI1 BRICD5 SNORD60 CASKIN1 SNHG19 MLST8 MIR940 TRAF7 DNASE1L2 MIR4717 E4F1 MIR3677 RNPS1 RAB26 PGP LOC106660606 ABCA3 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |