Assay Details
Target Gene Details
Entrez Gene ID: | 152330 |
Gene Name: | contactin 4 |
Gene Aliases: |
AXCAM, BIG-2 |
Location: |
Chr.3:2098771-3059080 on Build GRCh38 |
Assay Gene Location: | Within Exon 33 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CNTN4 | NM_001206955.1 | 24 | 4080 | NP_001193884.1 |
NM_001206956.1 | 16 | 2799 | NP_001193885.1 | |
NM_175607.2 | 25 | 4035 | NP_783200.1 | |
NM_175613.2 | 16 | 2802 | NP_783302.1 | |
XM_006713004.3 | 24 | 4045 | XP_006713067.1 | |
XM_011533425.2 | 24 | 4048 | XP_011531727.1 | |
XM_011533426.2 | 25 | 4267 | XP_011531728.1 | |
XM_011533427.2 | 25 | 4248 | XP_011531729.1 | |
XM_011533428.2 | 23 | 4237 | XP_011531730.1 | |
XM_011533429.2 | 23 | 4172 | XP_011531731.1 | |
XM_011533430.2 | 23 | 4133 | XP_011531732.1 | |
XM_011533431.2 | 22 | 6882 | XP_011531733.1 | |
XM_017005782.1 | 25 | 3990 | XP_016861271.1 | |
XM_017005783.1 | 26 | 4864 | XP_016861272.1 | |
XM_017005784.1 | 24 | 4325 | XP_016861273.1 | |
XM_017005785.1 | 25 | 3972 | XP_016861274.1 | |
XM_017005786.1 | 23 | 4234 | XP_016861275.1 | |
XM_017005787.1 | 23 | 4130 | XP_016861276.1 | |
AF464063.1 | 6 | 1946 | AAN86141.1 | |
AY090737.1 | 24 | 3917 | AAM00025.1 |
Target Gene Details
Entrez Gene ID: | 100873975 |
Gene Name: | CNTN4 antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.3:3039661-3061145 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CNTN4-AS1 | NR_046554.1 | |||
BM920658.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv589371 | Chr.3:2170634 - 3594980 on Build GRCh38 | Loss | CNTN4-AS1 CRBN TRNT1 IL5RA LOC100130207 CNTN4 |
esv2751994 | Chr.3:2200757 - 3178886 on Build GRCh38 | Gain | CNTN4-AS1 CRBN TRNT1 IL5RA CNTN4 |
esv2422274 | Chr.3:2100396 - 3314907 on Build GRCh38 | Duplication | CNTN4-AS1 CRBN TRNT1 IL5RA CNTN4-AS2 LOC100130207 CNTN4 |
nsv1011872 | Chr.3:2782874 - 3057776 on Build GRCh38 | Gain | CNTN4-AS1 CNTN4 |
nsv521796 | Chr.3:3038825 - 3151219 on Build GRCh38 | Loss | CNTN4-AS1 CRBN TRNT1 IL5RA CNTN4 |
dgv4636n100 | Chr.3:2825734 - 3271845 on Build GRCh38 | Gain | CNTN4-AS1 CRBN TRNT1 IL5RA LOC100130207 CNTN4 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |