Assay Details
Target Gene Details
Entrez Gene ID: | 201254 |
Gene Name: | stimulated by retinoic acid 13 |
Gene Aliases: |
CENP-X, CENPX, D9, FAAP10, MHF2 |
Location: |
Chr.17:82018703-82022930 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 1 - Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
STRA13 | NM_001271006.1 | NP_001257935.1 | ||
NM_001271007.1 | NP_001257936.1 | |||
NM_144998.3 | NP_659435.2 | |||
XM_005256339.2 | XP_005256396.1 | |||
XM_017024326.1 | XP_016879815.1 | |||
XM_017024327.1 | XP_016879816.1 | |||
XM_017024328.1 | XP_016879817.1 | |||
XM_017024329.1 | XP_016879818.1 | |||
BC009571.1 | AAH09571.1 | |||
BC011610.1 | AAH11610.1 | |||
BI837753.1 | ||||
CB110145.1 | ||||
HY110543.1 | ||||
U95006.1 | AAB53638.1 | |||
U95007.1 | AAB53639.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv952392 | Chr.17:81885825 - 82065724 on Build GRCh38 | Deletion | NOTUM SIRT7 PYCR1 ANAPC11 PCYT2 MAFG STRA13 ASPSCR1 RAC3 ALYREF GPS1 LRRC45 RFNG MAFG-AS1 MYADML2 NPB DUS1L DCXR |
nsv576183 | Chr.17:81991355 - 82086850 on Build GRCh38 | Loss | STRA13 ASPSCR1 RAC3 GPS1 LRRC45 FASN DUS1L DCXR RFNG |
nsv428351 | Chr.17:81152631 - 83064073 on Build GRCh38 | Gain | FAAP100 ASPSCR1 LINC00482 GPS1 MIR4740 AATK MRPL12 FASN LOC100130370 MAFG-AS1 WDR45B BAHCC1 FN3KRP SLC25A10 DCXR NARF ANAPC11 OXLD1 RAB40B SLC16A3 NPLOC4 CD7 STRA13 ARHGDIA CCDC137 TEPSIN LOC101929511 TBCD TMEM105 C17orf89 MCRIP1 GCGR CEP131 MYADML2 FN3K SNORD134 CSNK1D ZNF750 OGFOD3 NOTUM MIR4525 MIR3186 PCYT2 P4HB MAFG SECTM1 ALYREF LRRC45 SLC38A10 ARL16 PPP1R27 C17orf62 FSCN2 LOC105371925 FOXK2 MIR6787 PDE6G AATK-AS1 LOC101929552 UTS2R DUS1L HEXDC SIRT7 HGS PYCR1 B3GNTL1 RAC3 ACTG1 LOC105376791 LOC105376790 RFNG MIR6786 CCDC57 TSPAN10 TEX19 NPB LOC105371944 |
nsv470620 | Chr.17:81516973 - 82064485 on Build GRCh38 | Loss | NOTUM PCYT2 P4HB MAFG FAAP100 ASPSCR1 ALYREF GPS1 MRPL12 LRRC45 ARL16 PPP1R27 FSCN2 MAFG-AS1 PDE6G SLC25A10 DUS1L DCXR SIRT7 HGS PYCR1 ANAPC11 OXLD1 NPLOC4 STRA13 RAC3 ARHGDIA CCDC137 RFNG MIR6786 MCRIP1 GCGR TSPAN10 MYADML2 NPB |
dgv5800n54 | Chr.17:82013189 - 82035336 on Build GRCh38 | Loss | STRA13 ASPSCR1 RAC3 LRRC45 |
esv21913 | Chr.17:81828123 - 83103548 on Build GRCh38 | Gain+Loss | ASPSCR1 GPS1 FASN MAFG-AS1 WDR45B FN3KRP DCXR NARF ANAPC11 RAB40B SLC16A3 CD7 STRA13 ARHGDIA LOC101929511 TBCD MCRIP1 MYADML2 FN3K SNORD134 CSNK1D ZNF750 OGFOD3 NOTUM MIR4525 PCYT2 P4HB MAFG SECTM1 ALYREF LRRC45 PPP1R27 C17orf62 FOXK2 MIR6787 LOC101929552 UTS2R DUS1L HEXDC SIRT7 PYCR1 B3GNTL1 RAC3 LOC105376791 LOC105376790 RFNG CCDC57 METRNL TEX19 NPB LOC105371944 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |