Assay Details
Target Gene Details
Entrez Gene ID: | 79680 |
Gene Name: | chromosome 22 open reading frame 29 |
Gene Aliases: |
BOP |
Location: |
Chr.22:19846138-19854848 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
C22orf29 | NM_024627.5 | 3 | 3964 | NP_078903.3 |
BX640785.1 | 2 | 4053 | CAE45875.1 | |
BX640969.1 | 3 | 3933 | CAE45984.1 | |
BX640998.1 | 3 | 3933 | CAE46001.1 |
Target Gene Details
Entrez Gene ID: | 54584 |
Gene Name: | G protein subunit beta 1 like |
Gene Aliases: |
DGCRK3, FKSG1, GY2, WDR14, WDVCF |
Location: |
Chr.22:19788411-19854939 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GNB1L | NM_053004.2 | NP_443730.1 | ||
AB051432.1 | ||||
AF238328.1 | AAG36826.1 | |||
AF301895.1 | AAG53933.1 | |||
AY007378.1 | AAG12162.1 | |||
BC012060.1 | AAH12060.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv834129 | Chr.22:19705617 - 19919068 on Build GRCh38 | Loss | C22orf29 GNB1L TXNRD2 GP1BB SEPT5-GP1BB SEPT5 TBX1 |
nsv953024 | Chr.22:19842078 - 19854877 on Build GRCh38 | Deletion | C22orf29 GNB1L |
esv3893434 | Chr.22:19470889 - 20343372 on Build GRCh38 | Gain | LINC00895 RTN4R MIR4761 C22orf29 LOC440792 MIR1286 ARVCF TBX1 RANBP1 ZDHHC8 TANGO2 GNB1L TXNRD2 MIR6816 MIR3618 MIR1306 SEPT5 DGCR6L CDC45 CLDN5 CCDC188 LOC284865 COMT GP1BB LOC101927859 SEPT5-GP1BB LINC00896 MIR185 TRMT2A UFD1L DGCR8 |
nsv828939 | Chr.22:19696032 - 20324465 on Build GRCh38 | Loss | RTN4R MIR4761 C22orf29 LOC440792 MIR1286 ARVCF TBX1 RANBP1 ZDHHC8 TANGO2 GNB1L TXNRD2 MIR6816 MIR3618 MIR1306 SEPT5 DGCR6L CCDC188 LOC284865 COMT GP1BB SEPT5-GP1BB LINC00896 MIR185 TRMT2A DGCR8 |
nsv828938 | Chr.22:19691069 - 20324465 on Build GRCh38 | Gain | RTN4R MIR4761 C22orf29 LOC440792 MIR1286 ARVCF TBX1 RANBP1 ZDHHC8 TANGO2 GNB1L TXNRD2 MIR6816 MIR3618 MIR1306 SEPT5 DGCR6L CCDC188 LOC284865 COMT GP1BB SEPT5-GP1BB LINC00896 MIR185 TRMT2A DGCR8 |
nsv834130 | Chr.22:19837923 - 19940567 on Build GRCh38 | Loss | C22orf29 GNB1L TXNRD2 |
esv3568260 | Chr.22:19777375 - 19881883 on Build GRCh38 | Loss | C22orf29 GNB1L TXNRD2 TBX1 |
esv3647279 | Chr.22:19719848 - 19878980 on Build GRCh38 | Gain | C22orf29 GNB1L TXNRD2 GP1BB SEPT5-GP1BB SEPT5 TBX1 |
dgv7983n54 | Chr.22:19762002 - 20321870 on Build GRCh38 | Gain | ZDHHC8 TANGO2 GNB1L TXNRD2 MIR6816 MIR3618 MIR1306 RTN4R MIR4761 DGCR6L CCDC188 LOC284865 COMT C22orf29 LINC00896 LOC440792 MIR1286 MIR185 ARVCF TRMT2A TBX1 DGCR8 RANBP1 |
esv3575418 | Chr.22:18161776 - 19963846 on Build GRCh38 | Gain | LOC102725072 PI4KAP1 LINC00895 DGCR9 MIR4761 TMEM191B DGCR6 LINC01311 C22orf29 USP18 DGCR10 RIMBP3 FAM230A GGT3P PRODH CLTCL1 GSC2 LOC100996415 LOC642643 DGCR5 HIRA TBX1 DGCR14 GNB1L TXNRD2 MRPL40 SEPT5 DGCR2 CDC45 LOC729461 TSSK2 CLDN5 LOC100996401 COMT LOC100996432 GP1BB C22orf39 SEPT5-GP1BB DGCR11 UFD1L SLC25A1 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |