Assay Details
Target Gene Details
Entrez Gene ID: | 59307 |
Gene Name: | single Ig and TIR domain containing |
Gene Aliases: |
IL-1R8, TIR8 |
Location: |
Chr.11:405716-417454 on Build GRCh38 |
Assay Gene Location: | Within Exon 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SIGIRR | NM_001135053.1 | NP_001128525.1 | ||
NM_001135054.1 | NP_001128526.1 | |||
NM_021805.2 | NP_068577.2 | |||
XM_005253044.2 | 9 | 1373 | XP_005253101.1 | |
XM_005253045.1 | 9 | 1269 | XP_005253102.1 | |
XM_005253046.1 | 9 | 1357 | XP_005253103.1 | |
XM_005253048.4 | 7 | 1063 | XP_005253105.1 | |
XM_017018099.1 | 9 | 1373 | XP_016873588.1 | |
XM_017018100.1 | 8 | 1202 | XP_016873589.1 | |
AK025099.1 | BAB15066.1 | |||
AK093427.1 | ||||
AK172830.1 | BAD18795.1 | |||
AY358342.1 | 8 | 1146 | AAQ88708.1 | |
BC003591.1 | AAH03591.1 | |||
BC025953.1 | AAH25953.1 | |||
BC106007.1 | AAI06008.1 | |||
BX369506.2 | ||||
CR457338.1 | CAG33619.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | MIR210HG SIGIRR LOC101059906 LRRC56 PHRF1 PTDSS2 LMNTD2 IFITM2 IFITM1 HRAS IFITM5 B4GALNT4 IFITM3 CDHR5 RNH1 RASSF7 MIR210 PKP3 PGGHG LOC143666 ANO9 IRF7 |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | MIR210HG MUC5AC LOC101059906 LMNTD2 PIDD1 SCT CRACR2B MUC6 DEAF1 RNH1 PANO1 RPLP2 MIR210 PKP3 CD151 TALDO1 SLC25A22 MUC2 LOC143666 PNPLA2 TOLLIP CEND1 MUC5B ANO9 IRF7 AP2A2 LOC171391 CHID1 SIGIRR PDDC1 LRRC56 PHRF1 PTDSS2 DRD4 TSPAN4 EPS8L2 HRAS TMEM80 POLR2L B4GALNT4 CDHR5 LOC101927503 MIR6744 RASSF7 SNORA52 |
nsv552776 | Chr.11:366710 - 432436 on Build GRCh38 | Loss | SIGIRR PKP3 B4GALNT4 ANO9 |
nsv951268 | Chr.11:368601 - 503700 on Build GRCh38 | Deletion | RNH1 SIGIRR PKP3 PTDSS2 B4GALNT4 ANO9 |
nsv552770 | Chr.11:356090 - 444628 on Build GRCh38 | Gain | SIGIRR PKP3 B4GALNT4 ANO9 |
dgv1012n100 | Chr.11:198510 - 427836 on Build GRCh38 | Gain | SIGIRR IFITM2 IFITM1 MIR6743 NLRP6 IFITM5 B4GALNT4 IFITM3 RIC8A BET1L PKP3 PGGHG SIRT3 ODF3 PSMD13 ANO9 |
nsv1159790 | Chr.11:340219 - 491334 on Build GRCh38 | Deletion | SIGIRR PKP3 PTDSS2 B4GALNT4 ANO9 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | MIR210HG LOC101059906 LMNTD2 PIDD1 SCT CRACR2B DEAF1 RNH1 PANO1 RPLP2 MIR210 PKP3 CD151 TALDO1 SLC25A22 LOC143666 PNPLA2 CEND1 ANO9 IRF7 AP2A2 LOC171391 CHID1 SIGIRR PDDC1 LRRC56 PHRF1 PTDSS2 DRD4 TSPAN4 EPS8L2 HRAS TMEM80 POLR2L B4GALNT4 CDHR5 RASSF7 SNORA52 |
nsv552822 | Chr.11:403545 - 408352 on Build GRCh38 | Loss | SIGIRR PKP3 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |