Genomic Map
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Target Gene Details
Entrez Gene ID: | 5976 |
Gene Name: | UPF1, RNA helicase and ATPase |
Gene Aliases: |
HUPF1, NORF1, RENT1, pNORF1, smg-2 |
Location: |
Chr.19:18831926-18868232 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| UPF1 | NM_001297549.1 | 2 | 560 | NP_001284478.1 |
| NM_002911.3 | 2 | 560 | NP_002902.2 | |
| XM_017027105.1 | 2 | 569 | XP_016882594.1 | |
| XM_017027106.1 | 2 | 569 | XP_016882595.1 | |
| AF074016.1 | 2 | 512 | AAC26788.1 | |
| BC039817.1 | 2 | 557 | AAH39817.1 | |
| BX331580.2 | 2 | 564 | ||
| BX364728.2 | 2 | 539 | ||
| D86988.1 | 2 | 494 | ||
| U59323.1 | 2 | 460 | AAC51140.1 | |
| U65533.1 | 2 | 516 | AAC50771.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv1151217 | Chr.19:18627369 - 19284914 on Build GRCh38 | Deletion |
 BORCS8-MEF2B
KLHL26
RFXANK
NCAN
CRTC1
DDX49
LOC102724360
CERS1
ARMC6
HOMER3
MEF2B
HAPLN4
BORCS8
SUGP1
GDF1
TM6SF2
NR2C2AP
SLC25A42
TMEM161A
UPF1
COMP
COPE
SUGP2
|
| nsv833777 | Chr.19:18765126 - 18920267 on Build GRCh38 | Loss |
CRTC1
DDX49
CERS1
UPF1
COMP
COPE
GDF1
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Gene Ontology Categories:
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