Hs01263890_cn

• Gene Symbol: FAT1
• Assay Reference Genome Location: Chr.4:186595858 on build GRCh38
• Cytoband: 4q35.2

Target Gene Details

• Entrez Gene ID: 2195
• Gene Name: FAT atypical cadherin 1
• Gene Aliases: CDHF7, CDHR8, FAT, ME5, hFat1
• Location: Chr.4:186587783-186726915 on Build GRCh38
• Assay Gene Location: Overlaps Intron 26 - Exon 27

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FAT1	NM_005245.3			NP_005236.2
	XM_005262834.2			XP_005262891.1
	XM_005262835.2			XP_005262892.1
	XM_006714139.2			XP_006714202.1
	X87241.1			CAA60685.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1025244	Chr.4:186498616 - 187363659 on Build GRCh38	Gain	FAT1 MTNR1A LOC339975 F11-AS1
dgv5495n100	Chr.4:186554708 - 186992197 on Build GRCh38	Gain	FAT1 MTNR1A
nsv1015619	Chr.4:186521299 - 186673904 on Build GRCh38	Gain	FAT1 MTNR1A
nsv525719	Chr.4:186490143 - 186599883 on Build GRCh38	Gain	FAT1 MTNR1A F11-AS1
nsv596417	Chr.4:186341335 - 186608750 on Build GRCh38	Gain	FAT1 MTNR1A F11-AS1
nsv1022361	Chr.4:186346140 - 188438508 on Build GRCh38	Gain	FAT1 LOC100506272 TRIML2 MTNR1A LOC339975 ZFP42 F11-AS1 TRIML1
dgv5494n100	Chr.4:186323525 - 186613274 on Build GRCh38	Gain	FAT1 MTNR1A F11-AS1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

cadherin

Gene Ontology Categories:

Process(es)

actin filament organization
cell adhesion
homophilic cell adhesion via plasma membrane adhesion molecules
establishment or maintenance of cell polarity
cell-cell signaling
anatomical structure morphogenesis
single organismal cell-cell adhesion
cell migration

Function(s)

calcium ion binding
protein binding