Assay Details
Target Gene Details
Entrez Gene ID: | 59307 |
Gene Name: | single Ig and TIR domain containing |
Gene Aliases: |
IL-1R8, TIR8 |
Location: |
Chr.11:405716-417454 on Build GRCh38 |
Assay Gene Location: | Within Exon 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SIGIRR | NM_001135053.1 | 10 | 1446 | NP_001128525.1 |
NM_001135054.1 | 10 | 1519 | NP_001128526.1 | |
NM_021805.2 | 10 | 1415 | NP_068577.2 | |
XM_005253044.2 | 9 | 1808 | XP_005253101.1 | |
XM_005253045.1 | 9 | 1704 | XP_005253102.1 | |
XM_005253046.1 | 9 | 1792 | XP_005253103.1 | |
XM_005253048.4 | 8 | 1416 | XP_005253105.1 | |
XM_017018099.1 | 10 | 1726 | XP_016873588.1 | |
XM_017018100.1 | 9 | 1555 | XP_016873589.1 | |
AK025099.1 | 10 | 1415 | BAB15066.1 | |
AK093427.1 | 7 | 1643 | ||
AK172830.1 | 10 | 1415 | BAD18795.1 | |
AY358342.1 | 8 | 1581 | AAQ88708.1 | |
BC003591.1 | 9 | 1345 | AAH03591.1 | |
BC025953.1 | 10 | 1374 | AAH25953.1 | |
BC106007.1 | 10 | 1496 | AAI06008.1 | |
BX369506.2 | 5 | 614 | ||
CR457338.1 | CAG33619.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | LMNTD2 PTDSS2 SIGIRR IFITM1 PGGHG IRF7 B4GALNT4 ANO9 PKP3 RASSF7 CDHR5 IFITM3 LOC143666 LRRC56 RNH1 HRAS LOC101059906 IFITM5 IFITM2 MIR210 MIR210HG PHRF1 |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | LMNTD2 PTDSS2 SCT MIR6744 ANO9 RASSF7 TALDO1 SLC25A22 PIDD1 POLR2L PNPLA2 TMEM80 LOC143666 CRACR2B HRAS LOC101059906 PDDC1 MUC5B DEAF1 DRD4 PHRF1 SNORA52 LOC101927503 MUC6 SIGIRR PANO1 CHID1 EPS8L2 IRF7 B4GALNT4 TOLLIP PKP3 CDHR5 AP2A2 MUC5AC LOC171391 MUC2 LRRC56 CEND1 RNH1 TSPAN4 MIR210 CD151 MIR210HG RPLP2 |
nsv552776 | Chr.11:366710 - 432436 on Build GRCh38 | Loss | SIGIRR B4GALNT4 ANO9 PKP3 |
nsv951268 | Chr.11:368601 - 503700 on Build GRCh38 | Deletion | PTDSS2 SIGIRR RNH1 B4GALNT4 ANO9 PKP3 |
nsv552770 | Chr.11:356090 - 444628 on Build GRCh38 | Gain | SIGIRR B4GALNT4 ANO9 PKP3 |
dgv1505n54 | Chr.11:198510 - 470331 on Build GRCh38 | Gain | RIC8A PSMD13 PTDSS2 SIGIRR IFITM1 BET1L PGGHG B4GALNT4 ANO9 PKP3 IFITM3 NLRP6 MIR6743 IFITM5 IFITM2 ODF3 SIRT3 |
nsv1159790 | Chr.11:340219 - 491334 on Build GRCh38 | Deletion | PTDSS2 SIGIRR B4GALNT4 ANO9 PKP3 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | LMNTD2 PTDSS2 SCT ANO9 RASSF7 TALDO1 SLC25A22 PIDD1 POLR2L PNPLA2 TMEM80 LOC143666 CRACR2B HRAS LOC101059906 PDDC1 DEAF1 DRD4 PHRF1 SNORA52 SIGIRR PANO1 CHID1 EPS8L2 IRF7 B4GALNT4 PKP3 CDHR5 AP2A2 LOC171391 LRRC56 CEND1 RNH1 TSPAN4 MIR210 CD151 MIR210HG RPLP2 |
nsv552822 | Chr.11:403545 - 408352 on Build GRCh38 | Loss | SIGIRR PKP3 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |