Assay Details
Target Gene Details
Entrez Gene ID: | 7917 |
Gene Name: | BCL2 associated athanogene 6 |
Gene Aliases: |
BAG-6, BAT3, D6S52E, G3 |
Location: |
Chr.6:31639028-31660900 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
BAG6 | XM_017011279.1 | 1 | 251 | XP_016866768.1 |
Target Gene Details
Entrez Gene ID: | 57827 |
Gene Name: | chromosome 6 open reading frame 47 |
Gene Aliases: |
D6S53E, G4, NG34 |
Location: |
Chr.6:31658298-31660772 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
C6orf47 | NM_021184.3 | 1 | 123 | NP_067007.3 |
AJ245433.1 | 1 | 84 | CAB51603.1 | |
BC012950.1 | 1 | 123 | AAH12950.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv462871 | Chr.6:31607499 - 31664357 on Build GRCh38 | Loss | SNORA38 BAG6 PRRC2A AIF1 APOM MIR6832 C6orf47 GPANK1 |
nsv1126749 | Chr.6:31457323 - 32594423 on Build GRCh38 | Deletion | TNXB SNORA38 ABHD16A GPSM3 C4B MIR6833 LSM2 LY6G6C SNORD117 EGFL8 DDAH2 HCG23 C6orf25 LY6G6E HSPA1A NCR3 PRRC2A ATP6V1G2-DDX39B MCCD1 GPANK1 LY6G5C LY6G5B TNF PPT2-EGFL8 MIR1236 HLA-DRA EHMT2 LTA MSH5 DDX39B-AS1 C6orf10 SNORD84 SKIV2L MSH5-SAPCD1 CYP21A1P BTNL2 STK19 BAG6 MIR6721 SNORD52 DDX39B RNF5 C2 NEU1 ZBTB12 LOC102725068 NELFE PBX2 NOTCH4 SAPCD1-AS1 VARS HSPA1B MIR6832 SNORD48 LST1 CLIC1 FKBPL LOC100507547 PRRT1 NFKBIL1 C6orf48 TNXA HCG26 PPT2 SAPCD1 SLC44A4 ATF6B HLA-DRB5 LOC101929163 CSNK2B CFB ATP6V1G2 MICB HLA-DRB1 C2-AS1 HSPA1L C4A HLA-DRB6 LY6G6D APOM LTB DXO AGPAT1 C6orf47 VWA7 HCP5 MIR4646 LY6G6F CYP21A2 AGER AIF1 LOC100287329 |
nsv1073969 | Chr.6:31456422 - 33480523 on Build GRCh38 | Deletion | SNORA38 GPSM3 C4B LY6G6C EGFL8 DAXX HCG23 LY6G6E PPP1R2P1 PSMB8 HSPA1A PSMB9 ATP6V1G2-DDX39B MCCD1 GPANK1 HLA-DOA HLA-DQA1 LY6G5B PPT2-EGFL8 PFDN6 KIFC1 LTA DDX39B-AS1 SKIV2L TAP1 MSH5-SAPCD1 STK19 BAG6 SNORD52 RNF5 ZBTB12 LOC102725068 PBX2 NOTCH4 SAPCD1-AS1 HSPA1B ZBTB22 MIR6832 SNORD48 CLIC1 FKBPL HCG24 LOC100507547 MIR6873 HLA-DPB2 HCG26 PPT2 HLA-DPB1 CSNK2B CFB MIR3135B MICB HLA-DRB1 B3GALT4 HLA-DRB6 DXO LOC100294145 MIR6834 MIR219A1 HCP5 LY6G6F HLA-DQB1 CYP21A2 AGER WDR46 CUTA HLA-DPA1 AIF1 LOC100287329 MIR5004 TNXB HCG25 ABHD16A HLA-DQA2 MIR6833 LSM2 TAP2 SNORD117 DDAH2 C6orf25 NCR3 PRRC2A VPS52 BRD2 TAPBP RGL2 LY6G5C TNF HLA-DQB1-AS1 MIR1236 HLA-DRA HLA-DQB2 EHMT2 MSH5 C6orf10 SNORD84 CYP21A1P BTNL2 RXRB RING1 MIR6721 ZBTB9 DDX39B C2 NEU1 NELFE HLA-DOB VARS COL11A2 LST1 PRRT1 PHF1 NFKBIL1 C6orf48 TNXA SAPCD1 SLC44A4 SYNGAP1 ATF6B SLC39A7 PSMB8-AS1 HLA-DRB5 LOC101929163 ATP6V1G2 HLA-DMB C2-AS1 HLA-DMA RPS18 HSPA1L C4A LY6G6D APOM LTB AGPAT1 C6orf47 HSD17B8 VWA7 MIR4646 |
dgv10403n54 | Chr.6:31312324 - 32049763 on Build GRCh38 | Loss | TNXB SNORA38 ABHD16A C4B LSM2 LY6G6C SNORD117 DDAH2 C6orf25 LY6G6E HSPA1A NCR3 PRRC2A ATP6V1G2-DDX39B MCCD1 GPANK1 LY6G5C LY6G5B TNF MIR1236 EHMT2 LTA MSH5 DDX39B-AS1 SNORD84 SKIV2L MSH5-SAPCD1 CYP21A1P STK19 BAG6 MICA SNORD52 DDX39B C2 NEU1 ZBTB12 LOC102725068 NELFE SAPCD1-AS1 VARS HSPA1B MIR6832 SNORD48 LST1 CLIC1 NFKBIL1 C6orf48 HLA-B TNXA HCG26 SAPCD1 SLC44A4 CSNK2B CFB ATP6V1G2 MICB C2-AS1 HSPA1L C4A LY6G6D APOM LTB DXO C6orf47 VWA7 HCP5 MIR4646 LY6G6F CYP21A2 MIR6891 AIF1 LOC100287329 |
nsv1112900 | Chr.6:31455323 - 33480423 on Build GRCh38 | Deletion | SNORA38 GPSM3 C4B LY6G6C EGFL8 DAXX HCG23 LY6G6E PPP1R2P1 PSMB8 HSPA1A PSMB9 ATP6V1G2-DDX39B MCCD1 GPANK1 HLA-DOA HLA-DQA1 LY6G5B PPT2-EGFL8 PFDN6 KIFC1 LTA DDX39B-AS1 SKIV2L TAP1 MSH5-SAPCD1 STK19 BAG6 SNORD52 RNF5 ZBTB12 LOC102725068 PBX2 NOTCH4 SAPCD1-AS1 HSPA1B ZBTB22 MIR6832 SNORD48 CLIC1 FKBPL HCG24 LOC100507547 MIR6873 HLA-DPB2 HCG26 PPT2 HLA-DPB1 CSNK2B CFB MIR3135B MICB HLA-DRB1 B3GALT4 HLA-DRB6 DXO LOC100294145 MIR6834 MIR219A1 HCP5 LY6G6F HLA-DQB1 CYP21A2 AGER WDR46 CUTA HLA-DPA1 AIF1 LOC100287329 MIR5004 TNXB HCG25 ABHD16A HLA-DQA2 MIR6833 LSM2 TAP2 SNORD117 DDAH2 C6orf25 NCR3 PRRC2A VPS52 BRD2 TAPBP RGL2 LY6G5C TNF HLA-DQB1-AS1 MIR1236 HLA-DRA HLA-DQB2 EHMT2 MSH5 C6orf10 SNORD84 CYP21A1P BTNL2 RXRB RING1 MIR6721 ZBTB9 DDX39B C2 NEU1 NELFE HLA-DOB VARS COL11A2 LST1 PRRT1 PHF1 NFKBIL1 C6orf48 TNXA SAPCD1 SLC44A4 SYNGAP1 ATF6B SLC39A7 PSMB8-AS1 HLA-DRB5 LOC101929163 ATP6V1G2 HLA-DMB C2-AS1 HLA-DMA RPS18 HSPA1L C4A LY6G6D APOM LTB AGPAT1 C6orf47 HSD17B8 VWA7 MIR4646 |
dgv10404n54 | Chr.6:31312550 - 32516591 on Build GRCh38 | Loss | TNXB SNORA38 ABHD16A GPSM3 C4B MIR6833 LSM2 LY6G6C SNORD117 EGFL8 DDAH2 HCG23 C6orf25 LY6G6E HSPA1A NCR3 PRRC2A ATP6V1G2-DDX39B MCCD1 GPANK1 LY6G5C LY6G5B TNF PPT2-EGFL8 MIR1236 HLA-DRA EHMT2 LTA MSH5 DDX39B-AS1 C6orf10 SNORD84 SKIV2L MSH5-SAPCD1 CYP21A1P BTNL2 STK19 BAG6 MICA MIR6721 SNORD52 DDX39B RNF5 C2 NEU1 ZBTB12 LOC102725068 NELFE PBX2 NOTCH4 SAPCD1-AS1 VARS HSPA1B MIR6832 SNORD48 LST1 CLIC1 FKBPL LOC100507547 PRRT1 NFKBIL1 C6orf48 HLA-B TNXA HCG26 PPT2 SAPCD1 SLC44A4 ATF6B LOC101929163 CSNK2B CFB ATP6V1G2 MICB C2-AS1 HSPA1L C4A LY6G6D APOM LTB DXO AGPAT1 C6orf47 VWA7 HCP5 MIR4646 LY6G6F CYP21A2 AGER MIR6891 AIF1 LOC100287329 |
nsv1161370 | Chr.6:31600692 - 31714252 on Build GRCh38 | Deletion | LY6G5C LY6G5B SNORA38 ABHD16A CSNK2B APOM MIR6832 C6orf47 MIR4646 LY6G6F LY6G6E BAG6 PRRC2A AIF1 GPANK1 |
nsv830627 | Chr.6:31528437 - 31692173 on Build GRCh38 | Loss | SNORA38 ABHD16A MIR6832 SNORD117 LST1 NFKBIL1 NCR3 PRRC2A ATP6V1G2-DDX39B MCCD1 GPANK1 LY6G5C LY6G5B TNF CSNK2B LTA ATP6V1G2 DDX39B-AS1 APOM LTB SNORD84 C6orf47 BAG6 AIF1 DDX39B LOC100287329 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |