Assay Details
Target Gene Details
Entrez Gene ID: | 2907 |
Gene Name: | glutamate ionotropic receptor NMDA type subunit associated protein 1 |
Gene Aliases: |
HNRGW, LFG1, NMDARA1, TMBIM3 |
Location: |
Chr.8:143990058-143993415 on Build GRCh38 |
Assay Gene Location: | Within Exon 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GRINA | NM_000837.1 | 7 | 1524 | NP_000828.1 |
NM_001009184.1 | 7 | 1412 | NP_001009184.1 | |
AB097026.1 | 7 | 1336 | BAC77379.1 | |
AK127640.1 | 7 | 1560 | ||
AK294127.1 | 8 | 1269 | ||
AL157442.1 | 1 | 255 | CAB75662.3 | |
BC041788.1 | 7 | 1370 | AAH41788.2 | |
BC084553.1 | 6 | 1261 | AAH84553.1 | |
U44954.1 | AAB94292.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv6445 | Chr.8:143961415 - 143994522 on Build GRCh38 | Insertion | GRINA PARP10 PLEC |
nsv470249 | Chr.8:143889098 - 144519234 on Build GRCh38 | Loss | SPATC1 DGAT1 RECQL4 GPT PPP1R16A TONSL MIR6847 MAF1 CYHR1 LRRC14 TONSL-AS1 GPAA1 MIR6849 HSF1 SHARPIN MIR7112 TMEM249 LOC101928953 MROH1 SMPD5 SLC39A4 MIR1234 MIR6846 BOP1 OPLAH EXOSC4 FBXL6 GRINA LOC101928902 MIR661 PARP10 SCRT1 CPSF1 CYC1 PLEC KIFC2 SCX HGH1 MIR6848 MIR939 ADCK5 WDR97 VPS28 MIR6893 SLC52A2 MFSD3 FOXH1 |
nsv515809 | Chr.8:143904439 - 144519234 on Build GRCh38 | Gain+Loss | SPATC1 DGAT1 RECQL4 GPT PPP1R16A TONSL MIR6847 MAF1 CYHR1 LRRC14 TONSL-AS1 GPAA1 MIR6849 HSF1 SHARPIN MIR7112 TMEM249 LOC101928953 MROH1 SMPD5 SLC39A4 MIR1234 MIR6846 BOP1 OPLAH EXOSC4 FBXL6 GRINA LOC101928902 MIR661 PARP10 SCRT1 CPSF1 CYC1 PLEC KIFC2 SCX HGH1 MIR6848 MIR939 ADCK5 WDR97 VPS28 MIR6893 SLC52A2 MFSD3 FOXH1 |
nsv612914 | Chr.8:143972494 - 144120626 on Build GRCh38 | Loss | SPATC1 MIR6846 OPLAH MIR6847 EXOSC4 MAF1 GRINA PARP10 CYC1 PLEC GPAA1 WDR97 SHARPIN SMPD5 |
dgv12431n54 | Chr.8:143845100 - 144161320 on Build GRCh38 | Loss | EPPK1 SPATC1 MIR6846 OPLAH MIR6847 EXOSC4 MAF1 GRINA MIR661 PARP10 CYC1 PLEC GPAA1 HGH1 WDR97 SHARPIN MROH1 SMPD5 |
nsv950015 | Chr.8:143866633 - 144125597 on Build GRCh38 | Deletion | EPPK1 SPATC1 MIR6846 OPLAH MIR6847 EXOSC4 MAF1 GRINA MIR661 PARP10 CYC1 PLEC GPAA1 WDR97 SHARPIN SMPD5 |
nsv1161815 | Chr.8:143775169 - 144080674 on Build GRCh38 | Deletion | MIR937 LOC642574 EPPK1 SPATC1 MIR6846 OPLAH MIR6847 EXOSC4 GRINA MIR661 PARP10 PLEC MIR6845 NRBP2 SCRIB PUF60 SMPD5 |
nsv470250 | Chr.8:143917934 - 144097007 on Build GRCh38 | Gain | SPATC1 GPAA1 MIR6846 OPLAH MIR6847 EXOSC4 GRINA MIR661 PARP10 CYC1 PLEC SMPD5 |
dgv12433n54 | Chr.8:143902404 - 144120626 on Build GRCh38 | Gain | SPATC1 MIR6846 OPLAH MIR6847 EXOSC4 MAF1 GRINA MIR661 PARP10 CYC1 PLEC GPAA1 WDR97 SHARPIN SMPD5 |
nsv612906 | Chr.8:143917935 - 144090784 on Build GRCh38 | Loss | SPATC1 GPAA1 MIR6846 OPLAH MIR6847 EXOSC4 GRINA MIR661 PARP10 PLEC SMPD5 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |