Assay Details
Target Gene Details
Entrez Gene ID: | 92745 |
Gene Name: | solute carrier family 38 member 5 |
Gene Aliases: |
JM24, SN2, SNAT5, pp7194 |
Location: |
Chr.X:48458537-48470256 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 16 - Exon 17 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC38A5 | NM_033518.3 | NP_277053.2 | ||
XM_005272694.3 | XP_005272751.2 | |||
XM_005272695.4 | XP_005272752.3 | |||
XM_005272697.2 | XP_005272754.2 | |||
XM_005272698.4 | XP_005272755.2 | |||
XM_006724569.3 | XP_006724632.1 | |||
XM_017029960.1 | XP_016885449.1 | |||
XM_017029961.1 | XP_016885450.1 | |||
AF276889.1 | AAK61856.1 | |||
AF318358.1 | AAL55865.1 | |||
AK094788.1 | ||||
BC019246.2 | AAH19246.1 | |||
BC027721.2 | AAH27721.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv528292 | Chr.X:48433286 - 49274368 on Build GRCh38 | Gain | WDR45 CCDC120 OTUD5 GATA1 TFE3 CACNA1F SYP-AS1 PCSK1N FOXP3 EBP SLC35A2 SLC38A5 MAGIX LOC101927635 TBC1D25 PLP2 GPKOW KCND1 HDAC6 WAS RBM3 TIMM17B ERAS FTSJ1 PQBP1 SYP PRICKLE3 PPP1R3F GLOD5 WDR13 SUV39H1 PORCN CCDC22 PIM2 PRAF2 GRIPAP1 |
esv32909 | Chr.X:48003374 - 49285646 on Build GRCh38 | Gain+Loss | SSX6 WDR45 SPACA5 CCDC120 OTUD5 GATA1 TFE3 CACNA1F ZNF630-AS1 SYP-AS1 SPACA5B PCSK1N FOXP3 EBP SLC35A2 SLC38A5 MAGIX LOC101927635 TBC1D25 SSX3 ZNF630 PLP2 GPKOW KCND1 SSX4B SSX5 HDAC6 WAS RBM3 TIMM17B ERAS FTSJ1 PQBP1 SYP ZNF182 PRICKLE3 PPP1R3F GLOD5 WDR13 SSX4 SUV39H1 PORCN CCDC22 PIM2 SSX9 PRAF2 SSX1 GRIPAP1 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |