Assay Details
Target Gene Details
Entrez Gene ID: | 339 |
Gene Name: | apolipoprotein B mRNA editing enzyme catalytic subunit 1 |
Gene Aliases: |
APOBEC-1, BEDP, CDAR1, HEPR |
Location: |
Chr.12:7649400-7670599 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
APOBEC1 | NM_001304566.1 | 4 | 534 | NP_001291495.1 |
NM_001644.4 | 4 | 541 | NP_001635.2 | |
NM_005889.3 | 3 | 513 | NP_005880.2 | |
AI380263.1 | 2 | 360 | ||
AI862416.1 | 2 | 368 | ||
BC096158.1 | 4 | 531 | AAH96158.1 | |
BC101972.1 | 4 | 528 | AAI01973.1 | |
BC101973.1 | 4 | 531 | AAI01974.1 | |
L25877.1 | 4 | 532 | AAA86766.1 | |
L26234.1 | 4 | 534 | AAA64230.1 | |
U72891.1 | 4 | 532 | AAD00185.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv1350n100 | Chr.12:7502541 - 7672399 on Build GRCh38 | Loss | APOBEC1 CD163 |
dgv263n67 | Chr.12:7607531 - 7652464 on Build GRCh38 | Gain | APOBEC1 |
nsv826213 | Chr.12:7578336 - 7678048 on Build GRCh38 | Gain | APOBEC1 |
nsv1036408 | Chr.12:7630029 - 7659414 on Build GRCh38 | Loss | APOBEC1 |
esv3580096 | Chr.12:7646240 - 7654203 on Build GRCh38 | Loss | APOBEC1 |
nsv557273 | Chr.12:7621432 - 7731755 on Build GRCh38 | Loss | GDF3 APOBEC1 DPPA3 CLEC4C |
nsv826216 | Chr.12:7615958 - 7665910 on Build GRCh38 | Gain | APOBEC1 |
dgv5e196 | Chr.12:7621924 - 7954221 on Build GRCh38 | Duplication | NANOG GDF3 APOBEC1 SLC2A14 NANOGNB SLC2A3 DPPA3 CLEC4C NANOGP1 |
nsv521149 | Chr.12:7604110 - 7684392 on Build GRCh38 | Loss | APOBEC1 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |