Assay Details
Target Gene Details
Entrez Gene ID: | 56114 |
Gene Name: | protocadherin gamma subfamily A, 1 |
Gene Aliases: |
PCDH-GAMMA-A1 |
Location: |
Chr.5:141330685-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA1 | NM_018912.2 | NP_061735.1 | ||
AF152318.1 | AAD43712.1 |
Target Gene Details
Entrez Gene ID: | 56113 |
Gene Name: | protocadherin gamma subfamily A, 2 |
Gene Aliases: |
PCDH-GAMMA-A2 |
Location: |
Chr.5:141338760-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA2 | NM_018915.3 | NP_061738.1 | ||
AF152322.1 | AAD43716.1 |
Target Gene Details
Entrez Gene ID: | 56112 |
Gene Name: | protocadherin gamma subfamily A, 3 |
Gene Aliases: |
PCDH-GAMMA-A3 |
Location: |
Chr.5:141344034-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA3 | NM_018916.3 | NP_061739.2 | ||
AB208927.1 | BAD92164.1 | |||
AF152323.1 | AAD43717.1 |
Target Gene Details
Entrez Gene ID: | 56111 |
Gene Name: | protocadherin gamma subfamily A, 4 |
Gene Aliases: |
PCDH-GAMMA-A4 |
Location: |
Chr.5:141355025-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA4 | NM_018917.3 | NP_061740.2 | ||
AF152324.1 | AAD43718.1 |
Target Gene Details
Entrez Gene ID: | 56104 |
Gene Name: | protocadherin gamma subfamily B, 1 |
Gene Aliases: |
PCDH-GAMMA-B1 |
Location: |
Chr.5:141350261-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB1 | NM_018922.2 | NP_061745.1 | ||
AF152330.1 | AAD43724.1 |
Target Gene Details
Entrez Gene ID: | 56103 |
Gene Name: | protocadherin gamma subfamily B, 2 |
Gene Aliases: |
PCDH-GAMMA-B2 |
Location: |
Chr.5:141360136-141512979 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB2 | NM_018923.2 | 1 | 294 | NP_061746.1 |
NM_032096.1 | 1 | 294 | NP_115267.1 | |
AF152331.1 | 1 | 294 | AAD43725.1 | |
AF152518.1 | 1 | 294 | AAD43778.1 | |
BC101805.1 | 1 | 357 | AAI01806.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759382 | Chr.5:140777355 - 141449115 on Build GRCh38 | Gain | PCDHB19P PCDHA6 PCDHB6 PCDHB13 PCDHB15 PCDHGB7 PCDHA4 PCDHGA2 PCDHA1 PCDHB3 PCDHB4 PCDHB10 PCDHGB8P PCDHGA1 PCDHA10 PCDHGB5 PCDHB2 PCDHGA3 PCDHGB3 PCDHB14 PCDHB16 PCDHGB2 TAF7 PCDHA11 PCDHA5 PCDHA3 PCDHAC1 SLC25A2 PCDHB9 PCDHB7 PCDHB11 PCDHGA7 PCDHB1 PCDHGA12 PCDHGA5 PCDHGA4 PCDHA2 LOC101926905 PCDHA8 PCDHGA8 PCDHB8 PCDHB18P PCDHB5 PCDHGB1 PCDHGB4 PCDHGA11 PCDHA9 PCDHA12 PCDHGA6 PCDHB12 PCDHAC2 PCDHGA10 PCDHA13 PCDHA7 PCDHGA9 PCDHGB6 PCDHB17P |
esv3606982 | Chr.5:141352280 - 141361411 on Build GRCh38 | Loss | PCDHGA4 PCDHGB2 PCDHGA1 PCDHGA2 PCDHGB1 PCDHGA3 |
nsv599922 | Chr.5:141341879 - 141416532 on Build GRCh38 | Loss | PCDHGA7 PCDHGB3 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGB2 PCDHGA2 PCDHGA10 PCDHGA9 PCDHGA8 PCDHGB6 PCDHGA1 PCDHGB1 PCDHGB4 PCDHGB5 PCDHGA3 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |