Assay Details
Target Gene Details
Entrez Gene ID: | 56114 |
Gene Name: | protocadherin gamma subfamily A, 1 |
Gene Aliases: |
PCDH-GAMMA-A1 |
Location: |
Chr.5:141330685-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA1 | NM_018912.2 | NP_061735.1 | ||
AF152318.1 | AAD43712.1 |
Target Gene Details
Entrez Gene ID: | 56113 |
Gene Name: | protocadherin gamma subfamily A, 2 |
Gene Aliases: |
PCDH-GAMMA-A2 |
Location: |
Chr.5:141338760-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA2 | NM_018915.3 | NP_061738.1 | ||
AF152322.1 | AAD43716.1 |
Target Gene Details
Entrez Gene ID: | 56112 |
Gene Name: | protocadherin gamma subfamily A, 3 |
Gene Aliases: |
PCDH-GAMMA-A3 |
Location: |
Chr.5:141344034-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA3 | NM_018916.3 | NP_061739.2 | ||
AB208927.1 | BAD92164.1 | |||
AF152323.1 | AAD43717.1 |
Target Gene Details
Entrez Gene ID: | 56111 |
Gene Name: | protocadherin gamma subfamily A, 4 |
Gene Aliases: |
PCDH-GAMMA-A4 |
Location: |
Chr.5:141355025-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA4 | NM_018917.3 | NP_061740.2 | ||
AF152324.1 | AAD43718.1 |
Target Gene Details
Entrez Gene ID: | 56110 |
Gene Name: | protocadherin gamma subfamily A, 5 |
Gene Aliases: |
CDH-GAMMA-A5, ME3, PCDH-GAMMA-A5 |
Location: |
Chr.5:141364331-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA5 | NM_018918.2 | NP_061741.1 | ||
AF152325.1 | AAD43719.1 |
Target Gene Details
Entrez Gene ID: | 56109 |
Gene Name: | protocadherin gamma subfamily A, 6 |
Gene Aliases: |
PCDH-GAMMA-A6 |
Location: |
Chr.5:141374084-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA6 | NM_018919.2 | NP_061742.1 | ||
AB209178.1 | BAD92415.1 | |||
AF152326.1 | AAD43720.1 | |||
BC146651.1 |
Target Gene Details
Entrez Gene ID: | 56108 |
Gene Name: | protocadherin gamma subfamily A, 7 |
Gene Aliases: |
PCDH-GAMMA-A7 |
Location: |
Chr.5:141382739-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA7 | NM_018920.3 | NP_061743.1 | ||
AB208958.1 | BAD92195.1 | |||
AF152327.1 | AAD43721.1 |
Target Gene Details
Entrez Gene ID: | 9708 |
Gene Name: | protocadherin gamma subfamily A, 8 |
Gene Aliases: |
PCDH-GAMMA-A8 |
Location: |
Chr.5:141391916-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA8 | NM_032088.1 | NP_114477.1 | ||
AF152328.1 | AAD43722.1 |
Target Gene Details
Entrez Gene ID: | 56107 |
Gene Name: | protocadherin gamma subfamily A, 9 |
Gene Aliases: |
PCDH-GAMMA-A9 |
Location: |
Chr.5:141402953-141512979 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA9 | NM_018921.2 | 1 | 1268 | NP_061744.1 |
NM_032089.1 | 1 | 1268 | NP_114478.1 | |
AF152329.1 | 1 | 1268 | AAD43723.1 | |
AF152516.1 | 1 | 1268 | AAD43776.1 | |
BC132769.1 | 1 | 1289 |
Target Gene Details
Entrez Gene ID: | 56104 |
Gene Name: | protocadherin gamma subfamily B, 1 |
Gene Aliases: |
PCDH-GAMMA-B1 |
Location: |
Chr.5:141350261-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB1 | NM_018922.2 | NP_061745.1 | ||
AF152330.1 | AAD43724.1 |
Target Gene Details
Entrez Gene ID: | 56103 |
Gene Name: | protocadherin gamma subfamily B, 2 |
Gene Aliases: |
PCDH-GAMMA-B2 |
Location: |
Chr.5:141360136-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB2 | NM_018923.2 | NP_061746.1 | ||
AF152331.1 | AAD43725.1 |
Target Gene Details
Entrez Gene ID: | 56102 |
Gene Name: | protocadherin gamma subfamily B, 3 |
Gene Aliases: |
PCDH-GAMMA-B3 |
Location: |
Chr.5:141370264-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB3 | NM_018924.4 | NP_061747.2 | ||
AF152332.1 | AAD43726.1 | |||
BC150172.1 |
Target Gene Details
Entrez Gene ID: | 8641 |
Gene Name: | protocadherin gamma subfamily B, 4 |
Gene Aliases: |
CDH20, FIB2, PCDH-GAMMA-B4 |
Location: |
Chr.5:141387885-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB4 | NM_003736.2 | NP_003727.1 | ||
AF152333.1 | AAD43727.1 |
Target Gene Details
Entrez Gene ID: | 56101 |
Gene Name: | protocadherin gamma subfamily B, 5 |
Gene Aliases: |
PCDH-GAMMA-B5 |
Location: |
Chr.5:141398128-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB5 | NM_018925.2 | NP_061748.1 | ||
AF152334.1 | AAD43728.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759382 | Chr.5:140777355 - 141449115 on Build GRCh38 | Gain | PCDHGA1 PCDHGA10 PCDHGB4 PCDHGA6 PCDHGB1 PCDHA2 PCDHB12 PCDHGA12 PCDHB2 PCDHA13 PCDHA9 PCDHB19P PCDHB14 TAF7 PCDHB13 PCDHB16 PCDHB4 PCDHB15 PCDHA1 PCDHA5 PCDHGA2 PCDHGA11 PCDHA10 PCDHA7 PCDHB1 PCDHB6 PCDHA4 PCDHA8 PCDHAC2 PCDHGA4 PCDHGA3 PCDHGA5 PCDHGB6 PCDHA11 PCDHB9 PCDHA12 PCDHGB8P PCDHGB7 PCDHB7 PCDHB17P PCDHGA9 PCDHB8 PCDHGB5 PCDHGA8 PCDHA3 PCDHA6 PCDHB3 PCDHAC1 PCDHB10 PCDHB18P PCDHB5 PCDHB11 PCDHGA7 LOC101926905 PCDHGB2 SLC25A2 PCDHGB3 |
nsv599922 | Chr.5:141341879 - 141416532 on Build GRCh38 | Loss | PCDHGA1 PCDHGA10 PCDHGB4 PCDHGA2 PCDHGA6 PCDHGB1 PCDHGA7 PCDHGB2 PCDHGA9 PCDHGB5 PCDHGA8 PCDHGA4 PCDHGA3 PCDHGA5 PCDHGB3 PCDHGB6 |
nsv519627 | Chr.5:141392860 - 141427689 on Build GRCh38 | Loss | PCDHGA1 PCDHGA10 PCDHGB4 PCDHGB8P PCDHGB7 PCDHGA2 PCDHGA11 PCDHGA6 PCDHGB1 PCDHGA7 PCDHGB2 PCDHGA9 PCDHGB5 PCDHGA8 PCDHGA4 PCDHGA3 PCDHGA5 PCDHGB3 PCDHGB6 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |